Gene Vapar_0041 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_0041 
Symbol 
ID7973999 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand
Start bp43726 
End bp44517 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content70% 
IMG OID644790643 
Productenoyl-CoA hydratase 
Protein accessionYP_002941970 
Protein GI239813060 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.917664 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCGAAG CCCCCGCATT TCATCATCAC CAAGAACTGC GCGAGGAGAT GCGCGGGCCC 
GTGATGTGGC TCACCATCGA CCGCGAGGAG CGCCGCAACG CCATCAGCCC CGGCGTGCTC
GCGGCGCTCT CGGCCGCACT GTCCCGCGCC GACGCCGACC GCGACGTGCG CGCCGTGGTC
ATCACCGGCG CGGGCACGCG CGCCTTCTGC GCCGGTGCCG ACCTGCAAGG CGGCGCCTCT
TTCAGGTTCG ACCCTGCCGA GCCGTACCAG GGCTTCGCCA ACCTCCTGCG CCAGGCCCGG
CAGCTGACGG TGCCGCTGGT CGCGCGCGTC AACGGTGCCT GCATGGCGGG CGGCATGGGC
CTCCTGGGCA TGTGCGACAT GGCGGTTGCC GGCAGCCACG CCGTGTTCGG CCTGCCCGAG
GTCAAGGTCG GCCTCTTTCC CGCCCAGGTG CTCAGCGTGC TCGGCAACCT GCTGCCGCGC
CGCGTGCTGG CCCAGATGTG CCTCACGGGC GAGCCCATCA CCGCCGCGCA GGCGCTCGAG
CACGGGCTCG TGAACCGCGT GGGCGAGAAC GTCGACGAAA GCCTGGACTG GCTGCTCGGC
CGCATGCTCG ACAAGTCGCC CGCCGCCATC CGCCGCGGCC TGTATACGAT GAAGAAGATC
GAGGCCATGG CCTTCGAGGA ATCGATCGCC TTCACCGAGA GCCAGATCGG CCTCTTCGCG
CTCACGGAAG ATGCGGCCGA AGGCCAGCTC GCCTTCCGCG AAAAGCGCAA GCCGCAGTGG
AGCGGCCGAT GA
 
Protein sequence
MAEAPAFHHH QELREEMRGP VMWLTIDREE RRNAISPGVL AALSAALSRA DADRDVRAVV 
ITGAGTRAFC AGADLQGGAS FRFDPAEPYQ GFANLLRQAR QLTVPLVARV NGACMAGGMG
LLGMCDMAVA GSHAVFGLPE VKVGLFPAQV LSVLGNLLPR RVLAQMCLTG EPITAAQALE
HGLVNRVGEN VDESLDWLLG RMLDKSPAAI RRGLYTMKKI EAMAFEESIA FTESQIGLFA
LTEDAAEGQL AFREKRKPQW SGR