Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_II1062 |
Symbol | |
ID | 6962373 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011313 |
Strand | - |
Start bp | 1156460 |
End bp | 1157008 |
Gene Length | 549 bp |
Protein Length | 182 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 643382305 |
Product | membrane protein |
Protein accession | YP_002265336 |
Protein GI | 209809797 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1495] Disulfide bond formation protein DsbB |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.166999 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACAGTA AAAATGTAAC GTTATTAAAT ATCCTTGGCC TGCTCGGTAT TACGTTTGTA TTATTGATGG GTTCAGTACT TCAGGTCGCT TGGAATGAGC TTCCTTGTCC GCTTTGTCTG CTTCAGAGAG TTGGTTTTGT TATGGTTATG TTTGGCTTTA TGCTAAACAT TATTTATGGC ACGCAACAAC GTCATTACGG GGTTATTCTT GTCGGTGCGC TGTTTGGTGC AGCAACCGCA TTACGCCAAG TATCACTTCA CGTGATCCCT GGAACTCCAG GATTTGGTAG CCCAATTTTA GGTATGCATT ACTACACATG GGCATTTGTT ATCTTTATGA TGGCGATTGT GGGTGTTGCT GTATTACTTA TGCTTTGGAA TAACGATTGG TCTACTGATA CTTACCAAAT GAATGCATTC GGTAAATTCG CCTGCGTCTT AGCTATTGTT GCTGTACTGG TTAATGTCCT TTCTACTTTT GTAGAATGTG GCCCATACCA ATGCCCAGAT AACCCTGTGA GCTATTGGTT ATTGGATATG TTTTCATAA
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Protein sequence | MNSKNVTLLN ILGLLGITFV LLMGSVLQVA WNELPCPLCL LQRVGFVMVM FGFMLNIIYG TQQRHYGVIL VGALFGAATA LRQVSLHVIP GTPGFGSPIL GMHYYTWAFV IFMMAIVGVA VLLMLWNNDW STDTYQMNAF GKFACVLAIV AVLVNVLSTF VECGPYQCPD NPVSYWLLDM FS
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