| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_II0953 |
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| Symbol | |
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| ID | 6962275 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011313 |
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| Strand | - |
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| Start bp | 1042850 |
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| End bp | 1044130 |
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| Gene Length | 1281 bp |
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| Protein Length | 426 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 643382212 |
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| Product | membrane protein |
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| Protein accession | YP_002265243 |
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| Protein GI | 209809704 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1253] Hemolysins and related proteins containing CBS domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGATATTG CCATTTTACT TTTTTTAATT GTGATTAATG GTGTGTTTGC TATGTCAGAA
ATTGCATTGA TGACAGCAAA AAAGAGTCGA TTACAAAAAT TAGCGGCAGA AGGAAGTAAG
TCTGCGGCAA GAGCGATAAA ACTGGGTGAA GACCCAACAC AATTTTTATC TACCGTACAA
ATAGGTATTA CCGTTATTGG TATCCTTAAC GGTATTTTGG GCGAAGCCGC CCTTGCGGGT
CCATTGTCTG AGTTGATTAT ATCCTTAGGC GTTCCAGCAA CCCTTGCACC GACGATTTCA
ACAATCTCAA CGGTAGTTAT TATTACGTAC GTTTCTATTG TTGTGGGTGA GCTTGTACCA
AAACGTATCG CTCAGTTCCA TGCAGAGCGT ATCTCGACGT TAATTGCAGG CCCTATTGGG
TTGCTTGCAT TAATCTCTAG ACCGTTTGTC TTCCTATTGT CTATTTCTAC CAATGGGATA
TTGCGTTTGT TTGGCCGTTC TAACACGGAT GAAGCATCGA TTACTGAAGA TGATATTCAT
GCATTATTGC ATGAAGGATC AGAGCAAGGC GTGATAGAAA AACAAGAACA CACAATGATG
CGCAATATCT TCCATTTAGA TGATAGAAAA GTCGCTTCAT TAATGACGCC AAGAAGTGAA
TTAGTCTATT TTGATATTGA ACAATCGTGG GATGAAAACT TACCTAAATT GTTGCGTTCA
GACTATTCAA TCTATCCCGT AACACGCGGT GGCATGGATC ACGTTCTGGG TTTCACAACG
TCTCGATTCT TATTAAAAGC GTCTCATCAA GAACATCGTA CAAAATGGGT AATGCGTAAC
TTATTACCAT GTTTAACGAT TCTAGAGAAC AAATTCGGCA GCCAATTGCT TGAGTTATTA
AGAACCACAG GCGAAGAAAT TGCGCTTGTT GTGGATGAAT ACGGTGATGC TCAAGGTATT
GTGACTCAAA AAGATTTATT GGAAGCGCTT GCGGGTGAAT TTAAGTCAGA AAACCCAAAT
GATTCATGGG CTGATCAAGT ATCAGATGAA GAATGGGTAC TTGATGGGTC CATCCCAATC
ACGGTATTAA AAGACACATT AAATCTAAAA ACATTGCCTG AAGAGAAAGA GGCAGATTAT
CAAACCTTAA CTGGTATGTT TATGTGGTTA ACGAGTAATG TTCCAACGAT TGGTGATTCA
GTTCAATACC AAGAATGGAA TTTTGAAGTA CTCTCGATTG ATAATAACAG AGCAAGTAAA
GTACGAGTTA CTCAGATTTA A
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| Protein sequence | MDIAILLFLI VINGVFAMSE IALMTAKKSR LQKLAAEGSK SAARAIKLGE DPTQFLSTVQ
IGITVIGILN GILGEAALAG PLSELIISLG VPATLAPTIS TISTVVIITY VSIVVGELVP
KRIAQFHAER ISTLIAGPIG LLALISRPFV FLLSISTNGI LRLFGRSNTD EASITEDDIH
ALLHEGSEQG VIEKQEHTMM RNIFHLDDRK VASLMTPRSE LVYFDIEQSW DENLPKLLRS
DYSIYPVTRG GMDHVLGFTT SRFLLKASHQ EHRTKWVMRN LLPCLTILEN KFGSQLLELL
RTTGEEIALV VDEYGDAQGI VTQKDLLEAL AGEFKSENPN DSWADQVSDE EWVLDGSIPI
TVLKDTLNLK TLPEEKEADY QTLTGMFMWL TSNVPTIGDS VQYQEWNFEV LSIDNNRASK
VRVTQI
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