| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_II0910 |
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| Symbol | |
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| ID | 6962455 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011313 |
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| Strand | - |
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| Start bp | 995856 |
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| End bp | 996752 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 643382175 |
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| Product | HTH-type transcription regulator, AraC-family |
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| Protein accession | YP_002265206 |
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| Protein GI | 209809667 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.576456 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGGTAG ATATCGATAA TGATAAAACA TTCAATCGAA TTGATACTAT TTTGGCGTAT
ATCCATGAAA ATATGGATAG CCCATTATCT GTTGAGATAC TTGCAGAAAT GAGTTGCTGG
TCTCGTTGGC AATTACAACG AGTGTTCCTA AGCCATACCG GAATGAATGT TGCTCAATAC
GTACGAGAGC TACGTTTAAG CATGGCGGCT CTTGAAGTGC TTAATAAAAA GTATCGTATG
TTAGATATAG CTTATTTATA TGGCTTTACC TCAGAGATAG CCTTTAGCCG TTCTTTTAAG
CAATACTTTA AAATGTCGCC GCGAGAGTAT CAAAAACAAG GTAAAAAAAT AGGTATTCGT
AAACCGTTTC TAAAAAGTCA AAGTCTGACA GAGATCCAAG GCTCAGGTTT CTATCAAGTG
CGATTAGAAT ATAAAGAAAG TTTCACGTTA ACGGGATTGC CTATCACGCT GCAAGGTTTG
TTTTCAGATG CTCCTGATTT CTTAGATAAA GTTCCTCAAG TGTGGGAAGA GCTTGATGGG
TATTTAAGCC AGGTGTCTTC ATTTCCAGAG AGTAAATATG GCGTTATTGA TACTCGAAAT
GATACCGAGT CCCTAATTTA CTGGGCAGGT GTTATTGAAG ATGAAAGTTT ATCATCAGTA
TTAATGTCAT TAAGTGAAAA CGTATTGCAA GTTATTATCC CATCTCAAGA ATACGCAGTT
CTGCCTTATA TAGGTCCTTC AAGTGGTTTG GCGAAGTCTG TTGAATGGTT GATCTCAGAA
TGGTTGCCGT TTTCAGGCCA TCAAGGCATT GAAGGATTTG ATCTTGAGAT TTATCATCTG
AATGAAAGTG AAGAAATCAT TGATGTTGAG TATTGGTTGC CGATCCGTAA CTCGTAG
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| Protein sequence | MSVDIDNDKT FNRIDTILAY IHENMDSPLS VEILAEMSCW SRWQLQRVFL SHTGMNVAQY
VRELRLSMAA LEVLNKKYRM LDIAYLYGFT SEIAFSRSFK QYFKMSPREY QKQGKKIGIR
KPFLKSQSLT EIQGSGFYQV RLEYKESFTL TGLPITLQGL FSDAPDFLDK VPQVWEELDG
YLSQVSSFPE SKYGVIDTRN DTESLIYWAG VIEDESLSSV LMSLSENVLQ VIIPSQEYAV
LPYIGPSSGL AKSVEWLISE WLPFSGHQGI EGFDLEIYHL NESEEIIDVE YWLPIRNS
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