Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_II0888 |
Symbol | |
ID | 6962225 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011313 |
Strand | - |
Start bp | 973015 |
End bp | 973890 |
Gene Length | 876 bp |
Protein Length | 291 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 643382156 |
Product | membrane protein |
Protein accession | YP_002265187 |
Protein GI | 209809648 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.704512 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAACTGGA TATTTTTTAC GTTATTGGCT GCGTTCAGTC AATCATGGCG AAATGCGTTT CAAAGTCGTT TAAGCAAAGA GCTAAATGTG ACCGGAGTTA CATTGTCACG TTTTTTATGG GCAAGTCCAT TGGCTTTTAT TTATTTGGCT TTACTTTATT GGGTCGATCC TGTGCCATGG CCGACTTTTA CTGAATATTC TTATTTGTTT ATTGTTGGTG CCTCTTTTAT GCAGATCATC GCGACGGCTT TGATGGTTGT TTTATTTAAA CAAAAGAATT TTGCTATTGG TGCTGGGCTT GCTAAAAGTG AAGCTCCTGT AGCGGCTTTT CTTGGGGTTT TATTTTTTGG AACGTCATTA TCACTGCTCG GTTGGGCAGG GGTTGCTATT GGTGCGGTTG CCGTTTTTAT ATTGAGTTGT CCTGATGGTA TTAAAAGTAT CTCACTGAAA ACTGTAATGA TTGGCCTAGG GTGCAGTACG TCTTTCGCGT TAACCTCATT ATGGATTAGA GAAGCAAGCC TAACGCTTAA CTTACCATTT CCTCACCGAG CCGCTTGGAT TTTACTGTTA GTCATTTTAT TGCAAACCAT CTTCCTTGTA GGCTATATGC TTTTTAATGA TCGCCAAACG CTAAAGGCCA TGTTTGTTAA ACCTAGATTG GTTGTGATGA CCAGTATCGC AAGTTTTATC GGTTCTTTAG GGTGGTTTAG TGCGATGTCA CTTCAAACCG TCCCATTAGT GAAAACCCTC GGACAAGTTG AGGTGTTTTT TACTATGCTA ATTTCATTGT TTTGGTTAAA AGAAAAAATC AAACGTAAAG ATATTATCGC GTTATTATTA ATTGCAATGG CGGCAGTATT GGTGATGTGG CACTAG
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Protein sequence | MNWIFFTLLA AFSQSWRNAF QSRLSKELNV TGVTLSRFLW ASPLAFIYLA LLYWVDPVPW PTFTEYSYLF IVGASFMQII ATALMVVLFK QKNFAIGAGL AKSEAPVAAF LGVLFFGTSL SLLGWAGVAI GAVAVFILSC PDGIKSISLK TVMIGLGCST SFALTSLWIR EASLTLNLPF PHRAAWILLL VILLQTIFLV GYMLFNDRQT LKAMFVKPRL VVMTSIASFI GSLGWFSAMS LQTVPLVKTL GQVEVFFTML ISLFWLKEKI KRKDIIALLL IAMAAVLVMW H
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