Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_II0663 |
Symbol | |
ID | 6962050 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011313 |
Strand | - |
Start bp | 725049 |
End bp | 725915 |
Gene Length | 867 bp |
Protein Length | 288 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 643381942 |
Product | integral membrane protein, putative transmembrane transporter |
Protein accession | YP_002264980 |
Protein GI | 209809442 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.447797 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATTTC GACCTGAACC GATCTTAATC ATCACCACCT TTTTAGCCGC TGCTGGTTGG GTTTTTTCAA AAGAAGCGAT TCAAGGATTA CCTCCGTTTG GTTTTATTGG TATTCGCTTT ATATTCGCTT CATTATGCCT TTTACCTTTT TGCTTTAGTG CACTAAAAAA AGCCGATGGA CAAGATTGTT TTCGTTCAAT GGGGGTGGGA GTATTACTTG CGGGTTCCAT TTTTTGTTGG ATCTACGCTA TCTCTATCAG CGATACGTTA GGTGAAGGCG CGTTTATAAT GAGCCTCTCC ATGCTGTTTG TTCCTTTATT GGCGTGGCCA TTGTTTGGTT CTAAACCACC ACGTGCATTT TGGTATTCAT TACCGATTGC ATTTATTGGT TTGTTTCTAC TGTCATGGAG TGATGGATGG AATATTGCAA CGAGTCAACT TTGGTTTATT GCTGCTGCTG TTGGGCTTGC TACGCACTTT AATTTTAACA GTAAATATTC GGCCAGTTTA CCGACGATAT TACTCACTAC ATTACAGCTA TTTACCGTTG GTTGCTTGGG CGTAGTGTTG TCGTTTTTCT TGGAAACGTG GCCGGAAGGG GTAAGTTTAA TTACCTGGAA GTGGGTATTA TTAAGTGTCT TACTTGCTAC AAGTTTGCGT TACTTAATGC AAACTGTAGG TCAAAAGTTA GTCAACCCAA CGAATGCCGC TATATTGATG CTACTTGAAC CTATTTGGAC AATGATGTTA AGCGTGTGGG TATATGATGA ATCGATGCCT CTTAATAAAA TCCTCGGATG TGCATTGTTA CTGCTGTCTT TATTTTTCTA CCGCTTTAGC CAGGTTAGAC CAAAATTCCG TCTTTGA
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Protein sequence | MKFRPEPILI ITTFLAAAGW VFSKEAIQGL PPFGFIGIRF IFASLCLLPF CFSALKKADG QDCFRSMGVG VLLAGSIFCW IYAISISDTL GEGAFIMSLS MLFVPLLAWP LFGSKPPRAF WYSLPIAFIG LFLLSWSDGW NIATSQLWFI AAAVGLATHF NFNSKYSASL PTILLTTLQL FTVGCLGVVL SFFLETWPEG VSLITWKWVL LSVLLATSLR YLMQTVGQKL VNPTNAAILM LLEPIWTMML SVWVYDESMP LNKILGCALL LLSLFFYRFS QVRPKFRL
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