| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_II0653 |
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| Symbol | |
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| ID | 6962040 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011313 |
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| Strand | - |
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| Start bp | 702984 |
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| End bp | 704693 |
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| Gene Length | 1710 bp |
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| Protein Length | 569 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 643381933 |
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| Product | putative extracellular solute-binding protein |
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| Protein accession | YP_002264971 |
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| Protein GI | 209809433 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4533] ABC-type uncharacterized transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAGTC CTCGTTTACG GAAACAATTT GATAAATTAT ACGATCGCTA TATTAATAAT
ACGTCTGGTA CACAGATTGA TGAGATAGCT AATTTGCTTT GCTGTACACG ACGTAATACC
CGTATGGTAT TAAATAAAAT GAGTGACGAA GGTTGGATCT CATGGACTCC TGCGGTTGGA
CGAGGAAAAA GTTCAGCATT AGCATTCTTT TCTTCTCCTG AATCAGTAAA TTATGGGCTT
GCGAAGAGAT ACATAAATGA AGGTAAGCTA GATGTTGCTC TTGATATTTT AGAAGGCAAT
CAAGATGTAT TGCTTGAATT GATCCATGGT GCTTTAGGGG TTTCTCATGA AAAAGGAAAG
CAAGTTGTTA AGCTTCCTTA TTATCGTCAG TTACAAACCT TAATGCCATC TCTTGCAATT
CGTCGTTCAG AGCAGCATTT AATGCAGCAA CTATTTAATG GATTAACTCA ATTAAATAAA
CGTGGTGATA TTGAGGGTGA TATTGCCCAT CATTGGGATA TGTTAACACC AACACATTGG
CGATTTTTCT TAAGACCAAG TATTGCTTTT CATGATGGAA AACCATTAAC GTTTCAGGAT
ATTAAAGATA CATTTTTTGC ATTATCGTCT AATTTTGTGT TTAGTCACAT ACAAGAGGTC
ACGAATCCAA ATCTTAATGT AGTTGATTTC ATTCTGACGA CTGACGATTA TTACTTTGAT
AGTAAATTGA CTCAGTTTAA TGCGAAAATA ATTCCAAATA CGGCTCATGA ATCAATCACC
TATGCTCGTT CTCCTATTGG AACCGGGCCA TACAAGGTCC GTGAAAATTC AGACAAAAAA
CTCACGTTAA TCGCAAATGA ACATTACTTT GGTTATAGAC CATTGATTGA TTCTGTTGAA
GTATGGACGT TACCTAATAT CGCACCAATT CAATTGAAAT TAGGTTTTGA AGTTTCTGAA
GGGGATCACT CTGTTAGTTA TGGTGAACAA GTAGATGCAG ATAGAGGGTG CACTTATCTA
CTATTAAATC GTCAGTCAGG ATTGGCTGTT AATTCGGATT GGAAAGAATA CTTATCGCAA
ACCATTACGC CGTTACTATT ATTAAATGAA TTACAAAATG CGAATATGAA TGGTATTGGA
TTATTTAACG CTTACGGGTT ATTACCTGGG TTACAGCATT GTTTGAATAG AAAGAAAATC
GCTTTTTTTC AACCAGAAAA AGGAAGCGTC GTCAGATTAG GGTATGAAAC AGAACATCCT
CTCTATCCTT TACTTGGGGC TATTATTAAA AGACGTCTTG CATTGGACGG TATCAAACTC
GTTATAAAAG AGTTTGATAC GATGGAATTA TTAGATTCCG AATGTACAGT ACACATTGAT
ATTTGGTTAC GCGGTATGAG TCTAGGAACA AATAGACCAG AAGCACTATT GTCGTGGTTA
TTTGCTTTTA ATGAAATAGA AAGAGCAATG CCTAAAAATG AATTTGAGCA TATTTCACAA
TTGATATCAG AATGGCAATC AGAACCACAT CAATCTTTCC CTGTGAATCA AATTTGTCGA
TATTTAGTGG AAACAAATCA GATAACGCCT TTATTTCATG GATGGATGGG GATCAGTGAA
GATGCAACAA ATAGCATTCA AAATGCGTCT TGTAATGGAC TTGGTTGGTT TGACTTCGAA
AAAGTGTGGA TTAAACCGGA AATGAACTAA
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| Protein sequence | MSSPRLRKQF DKLYDRYINN TSGTQIDEIA NLLCCTRRNT RMVLNKMSDE GWISWTPAVG
RGKSSALAFF SSPESVNYGL AKRYINEGKL DVALDILEGN QDVLLELIHG ALGVSHEKGK
QVVKLPYYRQ LQTLMPSLAI RRSEQHLMQQ LFNGLTQLNK RGDIEGDIAH HWDMLTPTHW
RFFLRPSIAF HDGKPLTFQD IKDTFFALSS NFVFSHIQEV TNPNLNVVDF ILTTDDYYFD
SKLTQFNAKI IPNTAHESIT YARSPIGTGP YKVRENSDKK LTLIANEHYF GYRPLIDSVE
VWTLPNIAPI QLKLGFEVSE GDHSVSYGEQ VDADRGCTYL LLNRQSGLAV NSDWKEYLSQ
TITPLLLLNE LQNANMNGIG LFNAYGLLPG LQHCLNRKKI AFFQPEKGSV VRLGYETEHP
LYPLLGAIIK RRLALDGIKL VIKEFDTMEL LDSECTVHID IWLRGMSLGT NRPEALLSWL
FAFNEIERAM PKNEFEHISQ LISEWQSEPH QSFPVNQICR YLVETNQITP LFHGWMGISE
DATNSIQNAS CNGLGWFDFE KVWIKPEMN
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