| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_II0651 |
|---|
| Symbol | |
|---|
| ID | 6962038 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Aliivibrio salmonicida LFI1238 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011313 |
|---|
| Strand | - |
|---|
| Start bp | 700026 |
|---|
| End bp | 701501 |
|---|
| Gene Length | 1476 bp |
|---|
| Protein Length | 491 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 643381931 |
|---|
| Product | membrane associated signal transduction protein,histidine kinase |
|---|
| Protein accession | YP_002264969 |
|---|
| Protein GI | 209809431 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTAACAA CCATAAGTAG GGGATTTACA GTGTTATATC AACGTCTTTT TATCTTCATA
CTTATGATGA TAAGTTTCTC ATCAAACGCC GCTAGCTTAG CAAATAAGAT TGATAGCTTT
AAAAAAGAAT TTAAGAAAAA AGACGCCGTT GAAATTTATG ATATACGCTT GATTCAAAAG
GAATACCCAA CCGTTTTATT GTCTCCAGAC ACCTTATTAC CCCAAACTGC GTCATACCCT
TTTAAGTACA TAAAACAGTT ATATAACAGT GCGAATAAGT GCAGTGGCCC ATGGCCGGTT
AGCCCATTAG TAGGTGAACC TTTAGTTCTT GTTAGAGCCT TATGCCAAGG GATTAAATTG
CCTACAAGTT GGTTTGCACG ATCTGGTATG ATTCATCCTG GTGGCGGTTC TTATGCTTAT
CGTTATGCAC AAATGTATCC TTCTCGTAAA GATTCATTGG CTAAGTTTAT GCACATTAAA
GAACGAGTAG TTGCACCAAA AGGCACGTTA TTACATCACT TACAAACAAT GGATGACAAT
GCGATTCGAG CGATCATTAG TGGCTCAGAT ACCATTATTG CTGATGGGCT TCTTTGGATA
AGAAAAGGAA GTCGTTATTA TCTCTATCCA ATGAAGCTAA AAGAACAGAA CCTGAATAAA
TTTGATTTAG AAATGGCCTT ATTTCAACAA GATTCAAATT GCTATGTCCG AAATGGTAAT
GTGTGTTGGA CAGAAAAAAG TGATTCTCAA ACGTTATCTT ATGTTGTGTT ATGTTTAGTG
TTCATCAATT TATGTTTGGC GATCGGTTGG GGCATCTCTC AGTGGAACAG CAAACGAAGA
GACATGAAAA GCCGAATGCT GGTTCTTCAG ATATTAACGC ACGAACTTCG TACACCTATT
GCAAGTTTGG CATTGACTGT TGAAGGATTT AGGCGACAAT TTGAATCATT ACCAGAGTCT
TTATATGATG AGTTTAGGCG TTTATGTGAA GACTCAAGAC GACTACGTCA ATTAGCAGAG
GCAAGTAAAG ATTATTTACA ATCTGACGAT AAAGGGTTTT CTACAGAGTG GATCCCATCG
GTAGAGGAGT GGCTAGGTTA TCGCTGTGAA GAATACAGAG AAGCTGTCAC CTTTAAAATT
AACTATGATG CATCAGTAAA GGTAAATATT TATTGGCTAG GTAATTGTAT TGATAATTTG
ATCAGTAATG CGCACAAATA TGGTGTGCCA CCAGTGATAT TAAATGTCAC AATGGAGCCA
AAGAAATTAA GAATAGAAGT CATTGATAGC GGCTCTTTAA CAAAAGCGAA TTGGAAAGAA
CTTAAAACGC CATTTGTGAG CAAAGCTGGC TTAGGTTTAG GCCTAACAAT TGTTGAGTCA
ATGATAAAAA GAATGGGGGG AAGCATGACA TTGCAAGGAC CCCCAACCAC ATTTATTTTG
GAGATACCGT GTGAAACAAA CAATCCTACT TGTTGA
|
|---|
| Protein sequence | MLTTISRGFT VLYQRLFIFI LMMISFSSNA ASLANKIDSF KKEFKKKDAV EIYDIRLIQK
EYPTVLLSPD TLLPQTASYP FKYIKQLYNS ANKCSGPWPV SPLVGEPLVL VRALCQGIKL
PTSWFARSGM IHPGGGSYAY RYAQMYPSRK DSLAKFMHIK ERVVAPKGTL LHHLQTMDDN
AIRAIISGSD TIIADGLLWI RKGSRYYLYP MKLKEQNLNK FDLEMALFQQ DSNCYVRNGN
VCWTEKSDSQ TLSYVVLCLV FINLCLAIGW GISQWNSKRR DMKSRMLVLQ ILTHELRTPI
ASLALTVEGF RRQFESLPES LYDEFRRLCE DSRRLRQLAE ASKDYLQSDD KGFSTEWIPS
VEEWLGYRCE EYREAVTFKI NYDASVKVNI YWLGNCIDNL ISNAHKYGVP PVILNVTMEP
KKLRIEVIDS GSLTKANWKE LKTPFVSKAG LGLGLTIVES MIKRMGGSMT LQGPPTTFIL
EIPCETNNPT C
|
|---|
| |