Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_II0626 |
Symbol | |
ID | 6962016 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011313 |
Strand | - |
Start bp | 678341 |
End bp | 678907 |
Gene Length | 567 bp |
Protein Length | 188 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 643381911 |
Product | PhnA protein |
Protein accession | YP_002264949 |
Protein GI | 209809411 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2824] Uncharacterized Zn-ribbon-containing protein involved in phosphonate metabolism |
TIGRFAM ID | [TIGR00686] alkylphosphonate utilization operon protein PhnA |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0555496 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCACTG CAAAAACGCT ATTAACTCGT TGCGATTCTA AATGTGAACT ATGTGGTTCA ACCTCTTCAC TTGCACCATT TGCTGTGCCG CCAATGACAG ATATCAATGT AGATAACTGT GTAATGATTT GTGATACTTG TACTGCACAA ATTGAAGATC CAGCAACTAT GGATGTAAAT CACTGGCGTT GTCTAAACGA CAGCATGTGG AGCCAAGTTC CTACTGTTCA AGTTATTTCT TATGTTCTTT TAAGCAAGCT TGTTTCTGAA TCTTGGGCTC AAGATTCTCT TGATATGATG TATGTTGAAG AAGACGTTAA AGAATGGGCT GAGAAAGCAC TTCTTGCTGA CGGCGAAAAA CCACGTGATA TTAACGGCGT TGAGCTTAAA AAAGGTGACG ACGTAACCGT TACTAAAGAC CTTCCAGTTA AAGGTACTAA CCAAGTTATC AAACAAGGCA CTGTTATCCG CGGTATCAAC CTTGGTGACG ACCCTCGCCT AGTTTCTGGT AAAGCTAACG GTGGTCAATC TATGTATGTA ATCGCTGAAT TCTGTCGTAA AAAGTAA
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Protein sequence | MSTAKTLLTR CDSKCELCGS TSSLAPFAVP PMTDINVDNC VMICDTCTAQ IEDPATMDVN HWRCLNDSMW SQVPTVQVIS YVLLSKLVSE SWAQDSLDMM YVEEDVKEWA EKALLADGEK PRDINGVELK KGDDVTVTKD LPVKGTNQVI KQGTVIRGIN LGDDPRLVSG KANGGQSMYV IAEFCRKK
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