Gene VSAL_II0525 details

Gene Information

• Locus tag: VSAL_II0525
• ID: 6961932
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Aliivibrio salmonicida LFI1238
• Kingdom: Bacteria
• Replicon accession: NC_011313
• Strand: -
• Start bp: 586749
• End bp: 587300
• Gene Length: 552 bp
• Protein Length: 183 aa
• Translation table: 11
• GC content: 44%
• IMG OID: 643381815
• Product: hypothetical protein
• Protein accession: YP_002264853
• Protein GI: 209809315

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCTTTAT CTTCCATCGC AGATCCCGGC GCTGCACCGC AGTCTCCCGC TTTACCTTTA 
GCGGATATTC ACTTGCCAGC GGCTCCAAGC CTGTCTTTAT CATGGCAAGG TTACGGGATG 
ATTATTTTCA TCATCTTAGT GATCGCCCTA CTCGTCTGGG CTTTGATTCG TTATCGTAAA 
AAACGTCAAT TACAACGTGT TGCTTTAGCT CAATTATCAA CGCTAAAACC AACACAAACC 
CGAGAAATTG CGACTTTATT AAAGCAAGCG GCATTGAGCC ATTTTCCTCG CCAAGACATT 
GCGGCATTAC ATGGCCTTGC ATGGTGGCAC TTTATTGAGC AAAAACTGCC CGTGAAGAAA 
CAAGCAAACG TGCATTTCTC TTCCCGTTCA GAAATGTTAG AACAGGCACT GTATGGACAA 
CACGAATTAT CAGAAATCAA TCAACAACGT TTCTATGATG ACACTCGTTA TTGGTTGACC 
CATGCACTGC CCATTAAACG AGTAGGCTCA CTACTCTCAT CAAGATCATC AAAAGGAAAA 
CAACATGATT GA 

 

Protein sequence

MSLSSIADPG AAPQSPALPL ADIHLPAAPS LSLSWQGYGM IIFIILVIAL LVWALIRYRK 
KRQLQRVALA QLSTLKPTQT REIATLLKQA ALSHFPRQDI AALHGLAWWH FIEQKLPVKK 
QANVHFSSRS EMLEQALYGQ HELSEINQQR FYDDTRYWLT HALPIKRVGS LLSSRSSKGK 
QHD