| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_II0488 |
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| Symbol | |
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| ID | 6961904 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011313 |
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| Strand | + |
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| Start bp | 546756 |
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| End bp | 547574 |
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| Gene Length | 819 bp |
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| Protein Length | 272 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 643381781 |
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| Product | putative binding protein-dependent transport system, membrane component |
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| Protein accession | YP_002264819 |
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| Protein GI | 209809281 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.970837 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTAAAT CATTCCTTAT AAATTCGACA TCAGCAACGA TAGGAAAGGT AACGTCAAAA
CCAATGCTAC AAAGCGTGAA ATCCATGATA AGAATCTTAA TCAGTGCGGT GGTTATTCTC
GGGTTTTGGC AATTCATCGT AATAGTTTTT GCTTTACCAA GCTTCATTTT ACCGAATCCA
TTGGCTGTCT TTACTAAATT AATACAGCGA TACGATGTGC TACTTGCTCA TTCATGGGTA
ACGGCTCAAG AGATCTTACT TGGTCTTGGT TTGGGCCTTT CTATGGGGCT GCTATTTGCG
CTTCAAATGC TGTTGTTTGA TCCACTTCGA CGTTGGTTAT TGCCAATTTT AATTGCGAGC
CAAGCGATCC CTGTTTTTGC TATCGCGCCT ATTTTGATGT TGTGGCTGGG TTATGGCATC
GCATCAAAGG TCGTGATGGC GGCATTAATT ATCTTTTTCC CTGTGACTAC CTGTTGTTAT
GACGGGCTGC GAAATACCCC AAGTGGTTAT CTTGATTTAG CCCACACGAT GGGTGCATCA
AAATGGCAAT TATTAAAATA CGTTCGCTTA CCTGCGGCTT TACCTGCGTT AGCGTCGGGT
ATCCGTGTTG CTGTTGTTGT CGCGCCTATT GGTGCGGTAG TTGGAGAATG GGTAGGCTCA
AGCGAAGGCC TCGGCTATTT AATGCTGCAA GCGAATGCTC GAATGATGAT AGATGAAATG
TTTGCTGCGT TATTCATTCT CGCGGCGCTA TCCGTCAGTT TGTATTTTCT TGCGGATGTA
TTGATTCAAA AACTCATACC GTGGCAACAC GATAAATAA
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| Protein sequence | MSKSFLINST SATIGKVTSK PMLQSVKSMI RILISAVVIL GFWQFIVIVF ALPSFILPNP
LAVFTKLIQR YDVLLAHSWV TAQEILLGLG LGLSMGLLFA LQMLLFDPLR RWLLPILIAS
QAIPVFAIAP ILMLWLGYGI ASKVVMAALI IFFPVTTCCY DGLRNTPSGY LDLAHTMGAS
KWQLLKYVRL PAALPALASG IRVAVVVAPI GAVVGEWVGS SEGLGYLMLQ ANARMMIDEM
FAALFILAAL SVSLYFLADV LIQKLIPWQH DK
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