| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_II0475 |
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| Symbol | sapF |
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| ID | 6961901 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011313 |
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| Strand | - |
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| Start bp | 534405 |
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| End bp | 535172 |
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| Gene Length | 768 bp |
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| Protein Length | 255 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 643381767 |
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| Product | peptide transport system ATP-binding protein SapF |
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| Protein accession | YP_002264806 |
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| Protein GI | 209809268 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG4167] ABC-type antimicrobial peptide transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGTTTCGAA AACAAATAAA AGAAGCGGTT AAACCAGTCA GCTTTTCTTT AGAAGCAGGA
CAAACCATTG GTTTTATTGG TGCAAATGGG TCAGGTAAAT CAACATTAGC AAGAATGTTA
GCCGGTGTTG TAGAACCAAC GTCTGGCGTT ATTAAAGTCA ATGGCGAAGT CTTAGACTAT
AAAGATTATC AGACTCGCTG TAAGTTGATT CGAATGATCT TCCAAGACCC TAATTCATCA
TTGAATCCAC GGATTCAGAT AGGTCGAATT TTAGAAGGTC CTTTAAAACG TAATACCAGC
ATGTCACCAG AAGCTCGTCA AAGCCGAGTT AAAGACACCT TACTACGTGT TGGCTTATTA
CCTGAGCATG CCTACTTCTA CCCACAAATG CTTGCAACGG GTCAAAAACA GCGAGTATCT
TTAGCCAGAG CCTTAATACT TCAGCCTTCC ATAATTGTTG CTGATGAAGC GTTGAATGGT
TTGGATATGG CAATGCGATC TCAAATCATT AACCTCTTCT TGGAACTACA ACAAGAAATG
GCGATTTCAT TCATTTATGT TTCTCAGCAC ATTGGTGTTG TAAAACACAT TACAGACAAA
GTAATGGTTA TGCATGAAGG AGAAGTGGTT GAAAAAGGGG TGACTCAAGA GATATTCACA
AACCCACAGC ATTCAATTAC TCAGCGTCTA TTAGAAAGCC ACTTTAATGC ACCAACGCAC
GATAGAAAAC AGCGTATCAG TGCGGCGACT CCTAAGATCG AGTGCTAG
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| Protein sequence | MFRKQIKEAV KPVSFSLEAG QTIGFIGANG SGKSTLARML AGVVEPTSGV IKVNGEVLDY
KDYQTRCKLI RMIFQDPNSS LNPRIQIGRI LEGPLKRNTS MSPEARQSRV KDTLLRVGLL
PEHAYFYPQM LATGQKQRVS LARALILQPS IIVADEALNG LDMAMRSQII NLFLELQQEM
AISFIYVSQH IGVVKHITDK VMVMHEGEVV EKGVTQEIFT NPQHSITQRL LESHFNAPTH
DRKQRISAAT PKIEC
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