| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_II0460 |
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| Symbol | |
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| ID | 6962504 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011313 |
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| Strand | - |
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| Start bp | 523092 |
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| End bp | 524165 |
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| Gene Length | 1074 bp |
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| Protein Length | 357 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 643381752 |
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| Product | putative mechanosensitive ion channel |
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| Protein accession | YP_002264792 |
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| Protein GI | 209809254 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0668] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTCCTT TCTTAAATTG GTGGAATGCA CTTCTGAATT TTCAAGAGAA TGATTGGGTA
CAGAACGTAC TCGTCATTAC TCTGTTTAGT GCATTTTTAT GGGTCGTATG GCGCATTGTA
GTCAACCGTC TTCAACATAT TACAAAAAAA ACCTCATTAC CTTGGGATGA CGCGGTAATT
ACAGCGCTCT CCTCCCCAGT CAGTCTGATT ATTTGGGTCT GGCCAGCAAC TGCCTCGTTT
AAAATAATGC TGTCAGGGCA TTTAAAGTTA GTACCCGATT GGATCCCCAC CCTTCAAGTA
TTCATTCTGG TTTGGGGTTT TATTTGGACC GCGTTACGGT TAACAACGTT AATTGAAAAA
CAAGTTCTTA CCAATCAAAA ACATGACATT ACAACCGTTT TAGCCCTTGG GAAAGTCGTC
CGCTTAATCT TTATTTCTCT TGGTTTATTA TCATTAATGC AGGGGATTGG ACTCAGTTTA
TCCGGTTTAT TAACCTTTGG TGGCGTCGGT GGCTTAGTGG TCGGTTTAGC GGCTAAAGAT
CTCTTGTCCA ACTTTTTTGG TGGAATGATG ATCTATTTTG ATCGCCCTTT CAAAGTCGGA
GATTGGATCC GCTCTCCTGA CCGCTCGATT GAAGGAACGG TTGAAACCAT CGGTTGGCGT
ATGACGGTAA TACGTACTTT TGATAAACGC CCTCTTTATG TGCCCAACTC CGTATTTAGT
AGCATTGTGG TTGAAAACCC ATCTCGTATG CTAAATCGAA GAATTAAAGA AGACATTGGT
ATTCGCTACG ATGACATTAG CAATATTGAG CAAATTGTAA TCGAAGTAAA AGCAATGCTT
GTTAATCATG AAGGCATCGA TTCGAATCAG ACCTTAATTG TTAACTTCAA TGGTTTTGGC
CCTTCTTCAT TAGATCTATT GGTCTACACT TTTACAAAAA CGGTCAATTG GATTGAATAC
CACCATGTTA AACAAGATGT ATTAATCAAA ATTGGGGACA TTATTGCCCA ACACGGTGCA
GAGATTGCCT TCCCGACTCA GACTCTAAAA ATTGAACAAT TACCGGCTAA TTAA
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| Protein sequence | MTPFLNWWNA LLNFQENDWV QNVLVITLFS AFLWVVWRIV VNRLQHITKK TSLPWDDAVI
TALSSPVSLI IWVWPATASF KIMLSGHLKL VPDWIPTLQV FILVWGFIWT ALRLTTLIEK
QVLTNQKHDI TTVLALGKVV RLIFISLGLL SLMQGIGLSL SGLLTFGGVG GLVVGLAAKD
LLSNFFGGMM IYFDRPFKVG DWIRSPDRSI EGTVETIGWR MTVIRTFDKR PLYVPNSVFS
SIVVENPSRM LNRRIKEDIG IRYDDISNIE QIVIEVKAML VNHEGIDSNQ TLIVNFNGFG
PSSLDLLVYT FTKTVNWIEY HHVKQDVLIK IGDIIAQHGA EIAFPTQTLK IEQLPAN
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