| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_II0428 |
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| Symbol | |
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| ID | 6961863 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011313 |
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| Strand | + |
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| Start bp | 481328 |
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| End bp | 484492 |
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| Gene Length | 3165 bp |
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| Protein Length | 1054 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 643381723 |
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| Product | integral membrane protein, putative two-component signal transducer |
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| Protein accession | YP_002264763 |
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| Protein GI | 209809225 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2206] HD-GYP domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.812941 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTGGTGA GAAAAGGATG TTTCACACAC AGAAAAATAT CAATCAAACT GGCACTTGGG
GGGTTGTTTG TATTTGCTAC TTTATTTACG GCATCAATAG CGATTGGGTT TCAGTATTAT
TTTAGTAAGC AACTCGCCAC AGAGAATGCA TTAACAACGT ATTCATCAAT GTCTACGATG
GTAAATACGC ACATCCGTTT TCTGGATACC GGGGCTTCAA ACGTAGGTAA AATTCTAGCA
AAGATTGGCA GCTCCCCTCA TTATCAAAGA AGAGAAGAGG ACATTAAAAA AATATTTACT
GAAGTATTAT CAAATAATCC TATCTTTTAT AGTATTTATA TTGCTTCTGA TAACGATGAT
TTTTTTCAAG TGATTAATTT GGATGCGTCA TTAATTATTA GAGAAAAATT GAATGCGGAT
AAAAATGATC GATGGGTGCT CGTTCAGGCC AAAGGAGACG GATCTCAACG GATTAAAACA
TTTTCTTATT ACTCTGACGA TTTTGTATTA AGAGACAAAA CAACAGCAGC CACTACTTAT
TACCCTTCAC AAAGACCTTG GTTTTTACAA GCTCAAGAAA ATGTATCTTA TAAAACTAAC
CCTTATTTCT TTCAATATCT TCAAATCACT GGGCAAACGT ATTCAATTAA GGTGGAAAAC
ACCGACAAAG TGATTGGCAT TGATATTGTT CTTTCATCGA TGTCGGATGC TTTAGTGTCA
TCTTCTCTTG GTAGTGCTCT TGAGAGTAAT CAAGAAGGGT TTATCTATAA AGATTCGGGT
GAAGTAATCG CTTCAAATTG GAATCATTCA TTCAAAAAAG CAGACATTGA GTCGGTTCCT
CTAAAGTTAA CGGAAGAAGA GAAAGCATTA GTTCAAAAAC GCGGTAAATT GAAAGTATCA
AACCAAATGG ATTGGCTTCC AATTGACTAT GCTGTCGCAG GTAAACCTGA AGGTTATGCC
ATCGAGTTAT TAGAAATTGT TTCTGAAATG ACAGGGCTAA AATTCAAATT TATTAATGGT
TTTTCTTGGA ATGAATTAGT TGAAGAATAT CAAAAGGGAG AAATAGACCT ATTACATTCG
ATATTAAAAA TAGACAATAA TTTAAAATTT GAACGTTACA GTGAACCTAT GTACCAACTG
CCGATTAGTA TTGTGACTAA GCAAACGGAC ATAAAAATAG AAAGACTTGA TCAGTTAAAT
GATAAAGCAC TCGCGGTTGT TAAAGATTGG TCAGTGATCC CTAAATTAAA ACAAGGTTAC
CCGCGAGTTG ATATCGTGAT ATTTGATACG ATTAAAGAGG CGTTGAGCTC CGTCGTATCG
GGTCGAACCG ATGCTGTTAT TGGTACGACG CTTACCTTGG GTGCCGCCAG TGAACAATAT
GTATTCAGTG ATTTAACTTT TCATCAGAAT GTGAGTATTT TAGGTTGGAA TGGCAGCTTG
AAATTCTTTT TTACAATGAA GAAAGAAGAT CAGGCGGTTA TAAATTTAAT TAATCGTGCT
ATCCAAAATA TTTCTTTAGC TCAGCGTTCA ATGTTAGAAG ACAAATGGAA TGGCAGTTAC
CATTTGACAG TGAAAGATCA AGAAAGAGAT CTTCTGGTGC CTTACCCAGA ATTAGTTACG
TTAGCTAACA GTGAAGGGCT ACAAGGCCAG TTGATACAAA AAGACCTCAA TGGCGTGATG
AAATATTTCT ATGTCAGCGC CATTAATGAA AATGAATATT TTGGGGTCGT TATTCCTAAT
GAACTTATTT ATTCAGAAGT GAACGAAAAA CTTTATGCCT CAATTTTACT AACGATGATT
GTGATGGTGC TATTTATTCC CTTTGCGTGG TTTTTAAGTG GACCAGTTGT TAAACCGATT
CGATTATTGC AAAAAGAAAC CATACAAATA AAAAATGGTA ATTATGATCA GGTACTAAAA
GTGGATAGCT ATATAAAAGA AGTATGGGAT TTATCCGTCT CAGTTGATGA TATGGTTAAA
GAGCTTATCC AACATGAAAA AAATCAAGAA GAGTTCGTAG AGTCTTTTAT TCAATTGATT
GCCCAAGCGA TAGATGATAA ATCGCCATAT ACGGCAGGGC ATTGTAATCG AGTGCCAATA
TTAGGAATGA TGTTAGCAAA AGCGGCTGAA ACGTCAAAAC GAGGCATCTT AAAAGACTTT
GTATTTCTCA ATGAGGATGA ACGTAGAGAG TTCAGAATTG CGGCTTGGCT TCATGATTGT
GGGAAGATAA CCACACCAGA ACATATTATT GATAAAGGAA CAAAACTAGA AGCCAATTAT
AATCGAATTC ATGAAATTCG CATGAGATTT GAAGTGTTAT GGCGTGATGC TGAAATTGAA
TATTATAAGG CGGTTCAAGA AACGCCAAAT AATGAATTAG AACTAAGAAA ACAAAAAGAG
TTAACACAGA AAGAATTAAG AAAAGAATTT GAATTTGTTG CCACTTGTAA TGTTGGTCAA
GAATTCATGA GTGAAGAGGC TCAAGATAAG ATCCATCTAA TTTCGAAAAA AGAATGGTTA
CGTTTTTTTG ATGACACCCT AGGCTTATCA CCAGCCGAAG AGCTAGCAAT AGATAAAAGC
ACGGTAACAC TGCCTATAAA AGAGCAATTA CTTAGTGATA AACCATATCA TCAAATTACC
CGTATCCGTT CGTTTGAAAT AAACCCAGAA TTTGGAATAA AAATGGAGGT CCCTGAATTA
CAGTATAATT TGGGGGAAAT ATATAATTTA TGCATTGAGC GTGGAACGTT AACGCCAGAA
GATCGCTTTA AAATTAATGA ACATATGATA AGTACAATCA AGATGCTAGA GAGCTTACCA
TTCCCACCTA AACTAGCTCG AGTTCCAAGA TATGCTTCAA CTCATCATGA AACCCTAAAA
GGAACGGGTT ACCCAAGAAA ATTAAGTGCT AAAGACGTGT CTGTTCCAGA GCGAATATTA
GTATTAGCTG ATATTTTTGA AGCCCTTACC GCATCTGATA GGCCTTATAA AAAAGCAAAA
CCAGTGAGTG TCGCTATTGA GATCATGCAT CAGATGGTTG TCGATGAATA TATTGATGAA
GATGTATTTA AGCTCTTTAT TGAAAGTGGT CTTTATATTG AGTATGCGAA AACATACCTA
CCAGAAGCGC AGTTAGATAC TGTCGATATT ACTAAGTATC TATAG
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| Protein sequence | MVVRKGCFTH RKISIKLALG GLFVFATLFT ASIAIGFQYY FSKQLATENA LTTYSSMSTM
VNTHIRFLDT GASNVGKILA KIGSSPHYQR REEDIKKIFT EVLSNNPIFY SIYIASDNDD
FFQVINLDAS LIIREKLNAD KNDRWVLVQA KGDGSQRIKT FSYYSDDFVL RDKTTAATTY
YPSQRPWFLQ AQENVSYKTN PYFFQYLQIT GQTYSIKVEN TDKVIGIDIV LSSMSDALVS
SSLGSALESN QEGFIYKDSG EVIASNWNHS FKKADIESVP LKLTEEEKAL VQKRGKLKVS
NQMDWLPIDY AVAGKPEGYA IELLEIVSEM TGLKFKFING FSWNELVEEY QKGEIDLLHS
ILKIDNNLKF ERYSEPMYQL PISIVTKQTD IKIERLDQLN DKALAVVKDW SVIPKLKQGY
PRVDIVIFDT IKEALSSVVS GRTDAVIGTT LTLGAASEQY VFSDLTFHQN VSILGWNGSL
KFFFTMKKED QAVINLINRA IQNISLAQRS MLEDKWNGSY HLTVKDQERD LLVPYPELVT
LANSEGLQGQ LIQKDLNGVM KYFYVSAINE NEYFGVVIPN ELIYSEVNEK LYASILLTMI
VMVLFIPFAW FLSGPVVKPI RLLQKETIQI KNGNYDQVLK VDSYIKEVWD LSVSVDDMVK
ELIQHEKNQE EFVESFIQLI AQAIDDKSPY TAGHCNRVPI LGMMLAKAAE TSKRGILKDF
VFLNEDERRE FRIAAWLHDC GKITTPEHII DKGTKLEANY NRIHEIRMRF EVLWRDAEIE
YYKAVQETPN NELELRKQKE LTQKELRKEF EFVATCNVGQ EFMSEEAQDK IHLISKKEWL
RFFDDTLGLS PAEELAIDKS TVTLPIKEQL LSDKPYHQIT RIRSFEINPE FGIKMEVPEL
QYNLGEIYNL CIERGTLTPE DRFKINEHMI STIKMLESLP FPPKLARVPR YASTHHETLK
GTGYPRKLSA KDVSVPERIL VLADIFEALT ASDRPYKKAK PVSVAIEIMH QMVVDEYIDE
DVFKLFIESG LYIEYAKTYL PEAQLDTVDI TKYL
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