Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_II0387 |
Symbol | glpD |
ID | 6962477 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011313 |
Strand | + |
Start bp | 429697 |
End bp | 431244 |
Gene Length | 1548 bp |
Protein Length | 515 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 643381683 |
Product | glycerol-3-phosphate dehydrogenase |
Protein accession | YP_002264725 |
Protein GI | 209809187 |
COG category | [C] Energy production and conversion |
COG ID | [COG0578] Glycerol-3-phosphate dehydrogenase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATAATG GAAACCAAAC ACACACAACC TGCGCTGTTT TAGATTTAAT CGTAGTGGGT GGTGGTATTA ATGGTGCAGG AATTGCCGCT GATGCTGCTG GGCGAGGCTT AACCGTTGGT TTGTATGAAG CATCAGATTT TGCTTCTGCA ACGTCATCAG CAAGCTCAAA GTTGATTCAC GGTGGTTTAC GTTATTTAGA ACATTATGAG TTTCGTTTAG TTTCAGAATC TTTAGCTGAG CGTGAAGTTC TGTTAGCCAA AGCACCACAT ATTGCCAAAC CAATGCGTTT CCGTTTGCCT CATCGCCCAT TTTTACGTCC AGCATGGATG ATCCGTGCCG GTCTGTTCCT TTATGATAAT TTAGGCAAAC GCACCACATT ACCAGCAAGT CATTCGGTTA ATTTAGCGGC GTCCGGTTTA CTAAAACCTG AGATGAAAAA AGGATTTGAA TATTCAGATT GTTGGGTTGA TGATGCGCGT TTGGTTATTT TAAATGCCAT GGCCGCAGAG AAAAATGGCG CAGAAGTGAA AAACTATTGC CGCGTTGAGA AAGCGACTCG TGTGGGGGGG TTATGGAATG TTACTCTTTT TGACGAGCAA ACGAACACGC GCTTTGAGCG TAAAACCAAA GCACTGGTTA ATGCGGCGGG TCCTTGGGTA AAGCAGTTTT TCGATGACAG TTTAGAAGAA GAATCGCCTC GTAATATTCG TTTAGTGAAA GGCTCTCATA TTGTGGTTCC TAGAATTCAC AATGAAGAGC AAGCGTACAT TCTGCAAAAT AAAGACAATC GTATTGTGTT TGTTATTCCT TATATGGAAG ACTTTTCTAT CATTGGCACA ACCGATGTGG AATACAAAGG CGACCCAAGC AAAGTCGAAA TATCAGAAGA CGAAGTAAAC TACTTAATTG ATGTCGTTAA TCAACATTTT GTTGAGCAAA TTCAACGTGA TGATGTAGTG TGGACTTACA GTGGTGTACG TCCATTATGT GATGACGAAT CTGATTCACC ACAAGCGATT ACGCGTGATT ACACATTAGA ACTTGAGCAA GAACTAGATC AAGCACCATT GCTTTCTATT TTTGGTGGAA AACTAACGAC ATACCGAAAA CTGGCTGAAA CGGCAATGAA AATGCTGAGC CCATATTTCA TGAAAATAGG TGCGTCGTGG ACAAGAGACG TCGCATTACC TGGTGGTGAT TTTGATTACC CTCGTACGCA ATTAGTGAAT AACATTTGCA GTAAACATAC GTGGTTAGCA GAGAAAACGG CAACACGATA CGTGAATCAA TTTGGTACCT TAGTCTGGAC ATTGTTAGAA AACATGGATT GTGAAGCGAA TATGGGACAG GTATTCGGTG AAGGGGTTTA TCAAGCTGAA ATTGATTATT TAATGCACCA TGAGTTCTCA CAAAAAGCAG AAGATGTATT GTGGAGAAGA ACTAAACTTG GTCTGTATTT AAGCAAAGAA GAACAAGTAA AAGTAGCTGA TTATATGAAT AGTTCAATAA CATCAAAGGT TGAAGTTAAA TTAGAACAAG TGAGTTAA
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Protein sequence | MNNGNQTHTT CAVLDLIVVG GGINGAGIAA DAAGRGLTVG LYEASDFASA TSSASSKLIH GGLRYLEHYE FRLVSESLAE REVLLAKAPH IAKPMRFRLP HRPFLRPAWM IRAGLFLYDN LGKRTTLPAS HSVNLAASGL LKPEMKKGFE YSDCWVDDAR LVILNAMAAE KNGAEVKNYC RVEKATRVGG LWNVTLFDEQ TNTRFERKTK ALVNAAGPWV KQFFDDSLEE ESPRNIRLVK GSHIVVPRIH NEEQAYILQN KDNRIVFVIP YMEDFSIIGT TDVEYKGDPS KVEISEDEVN YLIDVVNQHF VEQIQRDDVV WTYSGVRPLC DDESDSPQAI TRDYTLELEQ ELDQAPLLSI FGGKLTTYRK LAETAMKMLS PYFMKIGASW TRDVALPGGD FDYPRTQLVN NICSKHTWLA EKTATRYVNQ FGTLVWTLLE NMDCEANMGQ VFGEGVYQAE IDYLMHHEFS QKAEDVLWRR TKLGLYLSKE EQVKVADYMN SSITSKVEVK LEQVS
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