Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_II0308 |
Symbol | |
ID | 6961764 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011313 |
Strand | - |
Start bp | 345063 |
End bp | 346583 |
Gene Length | 1521 bp |
Protein Length | 506 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 643381609 |
Product | putative response regulator |
Protein accession | YP_002264651 |
Protein GI | 209809113 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAGATT CTATTTTACT CTTTGAAAAT ATCCAACCGA CTTCTCTTGA AGCCATAAGA GTATTACGCC TGTCACTCTC GAAAATTCTC GATCGCCTTG ATGTGCAAAA AACGGTTAAG AATCCTTGCT TATTATGCTT CTCAGAGTGG AGCACCAACC TTGTTCTCCA CCCAAAGAAT CCAAGTAAAA GCATCACTAT CGCATTAAGA AAAACCAAAC ATCATTGGCA ACTTGATATC ATCGATGATG GTGAAGCGTG GGATCCAACG GCACAACCTA GCAATACCGA TATAGGCGAT TTTTCATTAA AATGCGGTGG GCGTGGGATT GATATCATTC AAAGCCAAAC CAATACCACC GCTTACCATT CTTTTGATAC TCATAACCTT TTTTCCATGA CATGGATCCG TGAAAACCAT CAAAAACGCC CTCATATTTT AATCGTAGAA GACGACGTCA TTCAGTGTAA ATTATACAGT GCTTACTTAA ATCAACAGTT TGATATTACT CTGACAAACA ATGGCAAAGA GGCCTTAGAT TTTTTAAAAA ATAATACCGT CGATCTCATT GTTTCCGATA TTCAAATGCC AAAAATGGGT GGATTAGAAT TACGTCAGCA TTTAGAGCAA GACAAAGACA TTTCGATTCC GTTTATCTTC TTATCCCACT TACAAGACAC CACAACGGTG AATAGTGCCG TTGATTTGGG CATCGATGAT TACCTAGAAA AACCCATTAA AAAAGATCAA CTTCTTTATA CTATTCAACG TGTTTTAGCT CGTTTCAATC AAGTTTATCA ATCGCTATCC AAACAAGTTA ACCAAAAAAT CACGCACACA TTATTACCAC AAATAGAGAT TCATTCTCCG CATTGGAAAC TCGCTATCCA GCAACGGAAT ACCGGACATG GTGGCGGTGA TTTCGTGCTC TCAATGGATG ATGACGACAT CACTCAGATC TTATTGGCGG ATGTCATGGG GCACGATGAA AGTGCGAAAT TCTTTGCTTA TGCTTATGCC GGTTATATTC GAGGGTTAAT GCAAAACTCA GATCTAAAGC ACCCAGCACA ACTTTTATCT ACCCTCTCAA ACAATGCATT CAAAGACCAA ATTTTGTCAC AAACGATGCT GACAAGTTGT TGTGTGAGTC TTCTTAATTC AAACACGTTA GCAATCAGCA GCGCTGGACA CCCACCGCCA ATACACATCA CAAATCGCGG CCTTAGTATC ATCAATGTTG AAGGTACATT GCCGGGGTTA TTACCAAACA CAACGTACCA AGAAACTAAA ATCACCTTAC AACAAAAAGA ACGTATTGCT TTTTTTACTG ATGGATTGTT TGAATCCGGA GATTCTTTAT CAGAACGAGA AACCCTTGAA AAAGCAGTGA AACAACAGTT AATTAATACC TTTGATTTAC CTATCGAATC AGCAATGGAA CAGATAATGC AGACCTTTGA TTCATTAGCC GGAACACCAC CAAATGACGA TGCTTTATTA CTGATAATAG AAAAACAATA A
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Protein sequence | MTDSILLFEN IQPTSLEAIR VLRLSLSKIL DRLDVQKTVK NPCLLCFSEW STNLVLHPKN PSKSITIALR KTKHHWQLDI IDDGEAWDPT AQPSNTDIGD FSLKCGGRGI DIIQSQTNTT AYHSFDTHNL FSMTWIRENH QKRPHILIVE DDVIQCKLYS AYLNQQFDIT LTNNGKEALD FLKNNTVDLI VSDIQMPKMG GLELRQHLEQ DKDISIPFIF LSHLQDTTTV NSAVDLGIDD YLEKPIKKDQ LLYTIQRVLA RFNQVYQSLS KQVNQKITHT LLPQIEIHSP HWKLAIQQRN TGHGGGDFVL SMDDDDITQI LLADVMGHDE SAKFFAYAYA GYIRGLMQNS DLKHPAQLLS TLSNNAFKDQ ILSQTMLTSC CVSLLNSNTL AISSAGHPPP IHITNRGLSI INVEGTLPGL LPNTTYQETK ITLQQKERIA FFTDGLFESG DSLSERETLE KAVKQQLINT FDLPIESAME QIMQTFDSLA GTPPNDDALL LIIEKQ
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