| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_II0305 |
|---|
| Symbol | |
|---|
| ID | 6961762 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Aliivibrio salmonicida LFI1238 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011313 |
|---|
| Strand | - |
|---|
| Start bp | 340176 |
|---|
| End bp | 341165 |
|---|
| Gene Length | 990 bp |
|---|
| Protein Length | 329 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 643381606 |
|---|
| Product | putative glycosyl transferase |
|---|
| Protein accession | YP_002264648 |
|---|
| Protein GI | 209809110 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0438] Glycosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGCTTGATA GCCGTGATTT TGGTGGCATT GAATCCCATG TGTTGCAACT TGCACAAGGG
TTAGCCACCG TTAACTGCGT CGTTACTGTC GTTTTTTTAT CCCGCTATAA AACGGAACAT
CCCTTACTAA CGGCGCTGAC TAACGCCAAT ATCTCTTATC ATTTTCTTGA TGGGAAATTC
ATGTCGTTAT TGCATTACAC TCAACAACAT CCTCCCACCG TCATACACTC TCATGGATAT
AAAGCCGCCA TCTATTCACG GTTATTACGT CTATCTTTGC TGCTATCCCC TCATAACGTA
CGTTTTATTA ATACTTTCCA CGCAGGAGAA ATTGGCTCAG GAAAACTACG TTGGTATGAC
CGAATTGATC GATGGAGTGC GGTATTAAGT CATCATAATT TTGCGGTAAG TGAACAGATA
AAACAACGCG TACACACCCC AATAACCGTA TTAAATAACT TTATATCTAC GGATCAATTA
TCCCTTTCTA ACGGAAAAGA AATTGCCTTT GTCGGACGAT TAAGCCATGA AAAAGCCCCC
GACCGATTCC TTCAATTAGC ACAACAACAC CCTAAACACG ATTTTCACAT TTACGGTTCA
GGACCAATGG AAAACGGCAT CGTTCAACAA GCCCCTATCA ATCTCATACT TCATGGACAC
CAATCCACAA TGGAGCACAT TTGGAAAGAC ATTGGATTAC TCGTTATTTG TTCACGCTAT
GAAGGATTAC CCATGGCGGC ATTAGAAGCC ATGGGGCGAG GTATTCCTAT CATTTCTACC
CCCGTAGGCA ACATGATTAA ATTGATTACT CAAGATAACA ATGGATGGAT CGTGGAACCC
GATGACCTAT CCGCACAACT CCAATATTGG TTTGACTTAG ATGATTCAGA TAAGGCGACC
ATTCAAGCAT CCGCACAGCA AACCATTCAA ACCGACTTTT CTACGCAAGC CATTATCCCT
CAGCTATTTG CGATTTACGC CAATACGTAA
|
|---|
| Protein sequence | MLDSRDFGGI ESHVLQLAQG LATVNCVVTV VFLSRYKTEH PLLTALTNAN ISYHFLDGKF
MSLLHYTQQH PPTVIHSHGY KAAIYSRLLR LSLLLSPHNV RFINTFHAGE IGSGKLRWYD
RIDRWSAVLS HHNFAVSEQI KQRVHTPITV LNNFISTDQL SLSNGKEIAF VGRLSHEKAP
DRFLQLAQQH PKHDFHIYGS GPMENGIVQQ APINLILHGH QSTMEHIWKD IGLLVICSRY
EGLPMAALEA MGRGIPIIST PVGNMIKLIT QDNNGWIVEP DDLSAQLQYW FDLDDSDKAT
IQASAQQTIQ TDFSTQAIIP QLFAIYANT
|
|---|
| |