| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_II0263 |
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| Symbol | |
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| ID | 6961725 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011313 |
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| Strand | - |
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| Start bp | 291527 |
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| End bp | 292363 |
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| Gene Length | 837 bp |
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| Protein Length | 278 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 643381568 |
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| Product | putative short chain dehydrogenase |
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| Protein accession | YP_002264610 |
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| Protein GI | 209809072 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.390771 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAATAATA AACCTTGGAT ATGCATTACC GGAAGTGCCA GTGGTCTAGG TAGGTACCTC
ACTGGAAAAT TATTGAATCA AGGGCATCAA ATAATAGCGA CCGACATTAA TAAAGAAGCA
TTACAAACGG TCAGTAAAGA AGATAACTGG ATAAGCCATA ATCTTATTTT AGAAACATTA
GACATAACGG TACTTGCAGA GTGGGAGCAA CTGTTAGAAA GGCATGCACC TAACGAAAAC
AGACAAGGAA ACAAAGTTTT CTCACACCTC TTAAATATTG CTGGCTTTAT CCAACCGGGG
GACGCATTTG AAAACACCGT AACGCAGTTT AAAAGGCACC TCGATATCAA TGTCATGGGC
ATGATTAATG GTTGCAGCGT TTTTCTGCCT CATTTCACAA AGCGTCAACA AGGCCACATT
ATTAATATCG CCTCGTTTGC AGGGATATTA CCGGTCCCCG GCGTCGTCGC TTATAGCACC
TCAAAAGCCG CCGCTCGTAG CTTCAGTAAT GGACTGGCTA TGGATTTATA TTTTACTAAC
TCCCCCATTA ATGTGTCTTG CGTGTGCCCT GATTTAATCG CAACACCAAT GATGGATAAG
CAAGTAGGTT ACGGTAAGCA CTCTCGATTT GTATTCTCAG GAGACAAACC ATTAACGGTT
GAAGAGGTCG GTGATACTAT TTTAACGACC GTCTGGCAGA AGAAACCAAT TGAAGTCGCG
TTACCACGTA AGAGAGAAAT ACAAGTTCGC TTACTTTCTC TTTTTCCAAA CTTAATGCTA
CCTGTTTATA AATATTTAGC GAAAAAAGGA GAAAAGAAAT TGGCTCGTTT GCAATAA
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| Protein sequence | MNNKPWICIT GSASGLGRYL TGKLLNQGHQ IIATDINKEA LQTVSKEDNW ISHNLILETL
DITVLAEWEQ LLERHAPNEN RQGNKVFSHL LNIAGFIQPG DAFENTVTQF KRHLDINVMG
MINGCSVFLP HFTKRQQGHI INIASFAGIL PVPGVVAYST SKAAARSFSN GLAMDLYFTN
SPINVSCVCP DLIATPMMDK QVGYGKHSRF VFSGDKPLTV EEVGDTILTT VWQKKPIEVA
LPRKREIQVR LLSLFPNLML PVYKYLAKKG EKKLARLQ
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