| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_II0170 |
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| Symbol | |
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| ID | 6961641 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011313 |
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| Strand | - |
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| Start bp | 195935 |
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| End bp | 197566 |
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| Gene Length | 1632 bp |
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| Protein Length | 543 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 643381488 |
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| Product | methyl-accepting chemotaxis protein |
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| Protein accession | YP_002264530 |
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| Protein GI | 209808992 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATAAGC TAGCAAATTT ACCAACTAAA CTACTCATGA TTATTGCTTT CTTTGTGACA
TTCATTTCAT TTATGTCTAT TTATGTTTCT GTAGATAATT CAAATGAAGA GATTGAAAAG
AACAGCGACG CAGTAGAAAA AACATACACG ATTATGGGAC TGGTTCAGCA TTCTTTAGAG
CAAGTGATTA ACATAGAAAC CGGTTTCAGG GGGTATATGT TAACTAATGA AAAGTCATCA
CTAATGCCTT ATGAGATGGG AGTAAGTTCG ATTAATTCAG ATCTTGAGAC GTTGTCCACC
TTTTTTTCTA ATAATCCTAC GACAGATCAA ACGAATAGAT TAAATACACT TATAAAAACT
TATTCAAATT GGAAAGAAAA CGTTATAGAT CAAGGGATAG AAATTCGGAA TACTAAAAGT
TTAAGTGAAG CTCTAGAGTT TATAGATAAA GCAGATGGAG AAAAATATGT TAATGAAATT
AGAATCGTAT TTGATAAGAT TTCTGCTGAA GAAAAAAAAT TCCTTGCTCA AAGAACGGAG
TTGTTGGATG AATCATTAAG TGGATTAATT TCAATTACAT TAATCTTAAC GTTTATAGGT
TGTTTTTGTT CTGCCGTTTT ATTCTTTATT ATAAATAATA TTATTAATAA TAACGTTAAT
GAAATGTCGT CGGCTATTGC TTTATTGGCG GATGGTGTTT TAAAACCGTT GCCTATTGTT
CCATCTAAAA ATGAATTTTT TAAAATTAAA CAAGAGTTCA ATAAATCGAT TGGAAGGCTA
TCAAATCTTA TTAATGAACT CACTATTTCA GCGGATAATA CGAGTTCTTC TTCTGAAGAG
TTGACTGCTG TTATGCAAAA TACCGCTAAA AATACTCAAA GTGAATTAGC TCAAGTAGAA
GAAATATCGA CGGCTATTAG TGAATTATCA AGTACTTCAA AAGAGGTATC ATCGAATGCG
GTTCAAGCTG AAGATGAAAC AAGAAAAGCA ATTGATAATG TAACTGAAGG AAATAAAGCG
TTAGAGCAAT CTATTTTATT AACTCAAAAC ATTAATGAAT CGGTTCAAGA AACGGCTTAT
ATGATCGAAG AGCTAAAAAA TAGCGCGATT GATATTGGAG AAGTAACAAA TGTGATTAGT
TCTATTTCTG AGCAAACTAA TTTATTAGCT TTGAATGCAG CGATTGAAGC AGCTCGTGCT
GGGGAACAAG GTCGTGGTTT TGCTGTGGTA GCCGATGAAG TGCGGAACTT AGCGGCTAAA
ACTCAAGAGT CGACTAAAAA TATTCAAGGC ATTATTTCTA CACTGCAAGC GCAATCAGAA
AAAGCAAATG ACAATATGGT AGCAAATGTT AATTCTATTC AAGAGTCAGT GGCATTATCT
CATAATGTGA AAGCTTCTTT TGATGATATT GCTCAATCGG TTCAAGCTAT CTCAGATATA
AATACCTTAG TCGCTACGGC TTCACAAGAG CAATACAATG TGACGGAAGA TATCGCTAAA
AATACCACGA GAACATTCGA TTTAGTCAAT GAGAATGTAG CGGCGGTGAA TCAGACACAA
CAAGCTGCGA AAGAATTAGC GCTATTGGCT GTAAAACAAA GCGAAGAGTT GTCTTTCTTT
AAGGTGAGTT AA
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| Protein sequence | MNKLANLPTK LLMIIAFFVT FISFMSIYVS VDNSNEEIEK NSDAVEKTYT IMGLVQHSLE
QVINIETGFR GYMLTNEKSS LMPYEMGVSS INSDLETLST FFSNNPTTDQ TNRLNTLIKT
YSNWKENVID QGIEIRNTKS LSEALEFIDK ADGEKYVNEI RIVFDKISAE EKKFLAQRTE
LLDESLSGLI SITLILTFIG CFCSAVLFFI INNIINNNVN EMSSAIALLA DGVLKPLPIV
PSKNEFFKIK QEFNKSIGRL SNLINELTIS ADNTSSSSEE LTAVMQNTAK NTQSELAQVE
EISTAISELS STSKEVSSNA VQAEDETRKA IDNVTEGNKA LEQSILLTQN INESVQETAY
MIEELKNSAI DIGEVTNVIS SISEQTNLLA LNAAIEAARA GEQGRGFAVV ADEVRNLAAK
TQESTKNIQG IISTLQAQSE KANDNMVANV NSIQESVALS HNVKASFDDI AQSVQAISDI
NTLVATASQE QYNVTEDIAK NTTRTFDLVN ENVAAVNQTQ QAAKELALLA VKQSEELSFF
KVS
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