| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_II0151 |
|---|
| Symbol | |
|---|
| ID | 6961627 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Aliivibrio salmonicida LFI1238 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011313 |
|---|
| Strand | + |
|---|
| Start bp | 176035 |
|---|
| End bp | 176925 |
|---|
| Gene Length | 891 bp |
|---|
| Protein Length | 296 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 643381471 |
|---|
| Product | ferrichrome-binding periplasmic protein |
|---|
| Protein accession | YP_002264513 |
|---|
| Protein GI | 209808975 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACAAAC TCATTGGCTT TATCATTCTA TTTTTTATTT CTTCCGTTCA AGCGATGGAA
ATCAAGCATG AACTGGGTAC GACTCAATTT ACGGAAACGC CTAAAAAAGT GGTGGTGTTA
GATTGGGCAT TAACGGAAAC CGTACTTAGC TTAGGGATTG TCCCGTTAGG TGCTGCCGAT
GTAGAAGGCT ACCAAACGTG GGTGATGGAA CCAGAGCTCA ATCGATCTGT TATGGATGTA
GGATCAAGAA GAGAGCCTAA TTTAGAATTA ATGACGGAAT TAAACCCTGA TGTGATTTTG
ATCAACCAAC ATATGTCTGC GATGTATGAG AAATTAAATA CCATTGCGCC TACATTGGTG
TACACCATTT ACAATGATAA GAAGGCCCCG TTGTCTTCAG CAAAAGACAT TACGGCTCAA
CTGGGCGTCT TATTTAATAA AGAAAAGCAG TCGGCTAAAG TGATAGCAGC AACAGAACAA
CGATTGCTTG CTAATGGAGA TAACGTTCAT CGTCTTCAAT CTAACAGTAA GCCGTTTTTG
TTTCTTCGTT TTGTTAATGA TAAAACGGTT CGAATTCACA GTGAGGGATC GCTGACCCAA
GATACGATTG ATGCGATGGG GTTAGTTAAC GCATGGCATG AACCGACTAA TATGTGGGGA
TTTACCACCG CAGGTGTCGA AAAGTTAGCG CAGTATCAAC AATCCAATGT GTTGATTTTT
GGACCTCTAA AAGAGACGGA AAGAAAGCAA TTAACGCACT CTGCATTATG GCAAGCGATG
GCATTTACTC GTACCGATTC GGTTTATGAG TTGCCTGCTA TTTGGACGTT TGGTGGCTTG
ATTTCAGCTC AACGTTTCAG TGATCATATT ACTCAGCAGT TAACTCAATA A
|
|---|
| Protein sequence | MNKLIGFIIL FFISSVQAME IKHELGTTQF TETPKKVVVL DWALTETVLS LGIVPLGAAD
VEGYQTWVME PELNRSVMDV GSRREPNLEL MTELNPDVIL INQHMSAMYE KLNTIAPTLV
YTIYNDKKAP LSSAKDITAQ LGVLFNKEKQ SAKVIAATEQ RLLANGDNVH RLQSNSKPFL
FLRFVNDKTV RIHSEGSLTQ DTIDAMGLVN AWHEPTNMWG FTTAGVEKLA QYQQSNVLIF
GPLKETERKQ LTHSALWQAM AFTRTDSVYE LPAIWTFGGL ISAQRFSDHI TQQLTQ
|
|---|
| |