| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_II0060 |
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| Symbol | |
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| ID | 6961547 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011313 |
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| Strand | + |
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| Start bp | 85578 |
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| End bp | 87731 |
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| Gene Length | 2154 bp |
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| Protein Length | 717 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 643381389 |
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| Product | putative type I toxin secretion system,ATP-binding protein |
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| Protein accession | YP_002264431 |
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| Protein GI | 209808893 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG2274] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.442032 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATACAT TAATTGCTTT TGATGAGATA CAAGAACGTC TTCATCATTT CAAAAATGGG
CATTTACAGA CCCGATATTC TGAAAACCCA TTACTGCTTG GACTCGCTTA CACTTTAGTC
ACGCTTGAAT GGGAAGGTAC GCCTGACATT CTGTCTGATG CGTTTTTATC TGACAGTGAG
CATGCGCTTT CATTTAATAA AACGCTGACT CGCCTTGACT ATCAATGCAT TGAAAGTGAC
ATTACTCATG CCGATCAATT TCTAGAATTG GATTGCCCTA GTTTTATCTC TTTGCAAGAT
CAGAACTATA TTTTATTAAA CTTTGATGAC GATATTCTCT ACCTTTATGA CTATGAAAAT
GACATCACCA TAGAAAGTGA AGCTAAAGGA AAAATCTCAG CTAAAGTGTG TTCGATTTCT
AAATATTCGC GTCTATTCAG AGAACCACCA CCTGAATCAC AAGATAAACG TAATTGGATA
AAACACGTTT TTTATCACTA CAACAATGAA TTCAAGAGCC TTGCATTATT AAGCCTTTTA
ATTAGTTTAT TAGGTACGCT TCAGCCTTTC TTTATTATGG GAGTGTATAC CTTTGCCTTA
ACCGCTGGAT CTACCTCTAC GCTCTATTGG CTTGCTTCTG GAGCGGTCGT AATAGCGGGA
ATGGAATATC TATTTAAAAA ACAACGTATG ACCATTTTAA ATACATCAGG CCAAGAGCTA
GCCCGTTATA TTTCTTATCA AGTCATCTCA AAACTACTAT GGCTGCCGTA TGCATTAACG
TCTAATGCGG CAACGTCTTC TCAACTTGCT CGTTTGAAAG ATATCGACCA ATTCCGTCAG
CTTGTCACCG CAGAATCTAG CCTGAGCTAT TTTGATTTGC CTTTTATCTT TATTTTCTTA
ATTGCTATTT TCATTATGTC TGGCAGCGCC GCGATAACCG TTATTATTGG TATCGTTATC
ATGATCTTGT TTTGCATTTA CGCACGCTAT ATTTATATGC AAGCCACATC AAAAAGCTCT
AGAGCAAATG CAATGGTGTC TTATCAATGG AATGAAGTAT TGAGTAATGT CAGTTCAATT
CAAAAGTTGC CGCTACTGTC GGTCATTAAA TCTCGTTTTA ATTCAGCATT AACTCAGCGT
TTACAAGATT CTCATCATGT TTCAGTAACC AATGCAAAAA TACAGCAATT GGGCAGCAGT
TTTATTCAAG TCATTGGCAC TACAACCATT GTGATCGCTG TAACCGCAGT AATGGCGGGA
GACACGAACC CCGGCGCCAT GCTTGCCATC ATTATCTTGG TTTGGAAAAC CTTAACCCCA
ATCATGGGGA TTTATAACTC CTTAGCAAAA ATTGATACCA TCAAAGCCTC AACCGCACAA
ATCAACGCAT TAATGTCTTT AGATGATGAT AAGAGTCGTA TAGAAAAAAG CCCCCCGATT
CATCAGTTCA GTGGTGAACT GTCCATTAAC GGCTTATCTC ATCGCTATCA AGGGATAAAT
AAAGGATTAA CTAACCTCTC TTTTGCTATT AAATCAGGCA ATAAAGTCTC TGTCTGTGCC
CCATCAGGCA GTGGCAAAAC AACATTGATG AATATTTTGA GCGGCATTGA ACCTCGCTTT
CAAGGTCGCT TATTGTTTGA TGGTTATAAC GTAAACCAAT TTAATAATTT CCGGTTCAGA
AACAGCATTT GTTATGTTCC TTTTGATATG CATTTATACC ACGGTACGGT TCACGCCAAT
TACACAATGT ACAATGGTTA TGTTCCACCC GCTTTCATTG ATGAAATGCT TAACTTTTTA
GACTTATTGC CTTATCTTCC TCAAGGAAAA AAGACCCTAT TAAGTGCTGA TTTTCTTTCG
ACATTGCCAG ATGGCATACA ACGCAAACTC ACTCTAGCGA TTGGCATCGG ATATTGCAGA
AAAAGAGTCG TTATCATGGA TGAACCTTTT GTCGGATCTG AGCATGAAAA CAGTAAATAT
CTCACCTCAT TATTCAGTGA ATATTTAGCC AACAGCACCG TTATCTTTAG CACCACAAGT
AAATCAATGG TAGCTACCTC TGATCAGTGT TTATTACTTG AAAAAGATGG CTCTCAAAAG
TTCTACGGCG CACCCGATAA AGTCCTACAG GCTGCACCCG TGATGCTGAC TTAA
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| Protein sequence | MDTLIAFDEI QERLHHFKNG HLQTRYSENP LLLGLAYTLV TLEWEGTPDI LSDAFLSDSE
HALSFNKTLT RLDYQCIESD ITHADQFLEL DCPSFISLQD QNYILLNFDD DILYLYDYEN
DITIESEAKG KISAKVCSIS KYSRLFREPP PESQDKRNWI KHVFYHYNNE FKSLALLSLL
ISLLGTLQPF FIMGVYTFAL TAGSTSTLYW LASGAVVIAG MEYLFKKQRM TILNTSGQEL
ARYISYQVIS KLLWLPYALT SNAATSSQLA RLKDIDQFRQ LVTAESSLSY FDLPFIFIFL
IAIFIMSGSA AITVIIGIVI MILFCIYARY IYMQATSKSS RANAMVSYQW NEVLSNVSSI
QKLPLLSVIK SRFNSALTQR LQDSHHVSVT NAKIQQLGSS FIQVIGTTTI VIAVTAVMAG
DTNPGAMLAI IILVWKTLTP IMGIYNSLAK IDTIKASTAQ INALMSLDDD KSRIEKSPPI
HQFSGELSIN GLSHRYQGIN KGLTNLSFAI KSGNKVSVCA PSGSGKTTLM NILSGIEPRF
QGRLLFDGYN VNQFNNFRFR NSICYVPFDM HLYHGTVHAN YTMYNGYVPP AFIDEMLNFL
DLLPYLPQGK KTLLSADFLS TLPDGIQRKL TLAIGIGYCR KRVVIMDEPF VGSEHENSKY
LTSLFSEYLA NSTVIFSTTS KSMVATSDQC LLLEKDGSQK FYGAPDKVLQ AAPVMLT
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