| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_II0028 |
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| Symbol | |
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| ID | 6961520 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011313 |
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| Strand | + |
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| Start bp | 36529 |
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| End bp | 37692 |
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| Gene Length | 1164 bp |
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| Protein Length | 387 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 643381360 |
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| Product | hypothetical protein |
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| Protein accession | YP_002264405 |
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| Protein GI | 209808867 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0790] FOG: TPR repeat, SEL1 subfamily |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATTGGA TACAAGTAGC AGTCACTGGA CTGGTTGTTT TATTAGTAAT GGTGTGTATT
AATTTCTTTT TTGCGAACAG TAAGCAAAGA AAGGTCGACG AAAGAAAAGA GAGAGAGGCG
ATCTCTTACC GTAGGGCGCT TTCGGAAGCT CGAGCAGCAG AAAGGCAAGA ACGAGTATAT
AAAGCACAAA CAGGGCATAT TTCGACACAG CTTTTTTTAG CCAAAGAAGC GGAAATGAAT
AATTTTGAAG AAGCATTGCA TTGGTATGAA ATGGCTGCAA ATCACGACAA CGCTATTGCC
ATCCGTTCTG TCATCCGCTT ATGTGATAGT CGTCGTGAAG ATTCTGAGTT AAAAAGTAAA
TCTAAATTTT GGGGGCAAGT CCTGGCTGCA GAAGAAGGTG GGGCCGAAAA AAAATTAGCG
TTAGGTATCG CCTTTATACA AGGTAATGGC GTTGATGCTA ATATTGAAAA AGGCATTGCA
TTAATTGATG AAGCGGCAGA AATGGAACAT ATTCCTGCTC AACTATTTAT TGCAGATTGG
TATGTGGCAG AAGCAAACCC TCAGCCTAAT GCGAAATTGG CGGCGGAATG GAATTTACGA
GCAGCGATGT TAGATAATAC CGAAGCTCAA ATACGTATTG GTAAACAATA TGCCGAAGGT
AAAGGCGTTG CCGTCGATCC TAAAAAAGCG ACATATTGGT TAGAACTTGC AGCAGAAAGT
GGTGATCCTA AAGCGCAATA TTTTGCGGGT GAAATGGGCG CAGACACGAC TGAAAAAGGC
AATTCTGTTG CGTATATTTG GTTTTGGTTA GCGGCTGCAA ATGGCATTGA AGCGGCAGCA
AGTCGACGAG ATCATGTTGG ACACTTAGTC GGTGTGGATG CTGTGATAGG TTTACAAGGA
ATGGCGAAAC CTCTTCATGA TAAAATGAAA CGAGGAAAGT TGAGAAAGCA CGCGGTTATT
AAGTCTTTAG ATAAACTGTA TCAAAGACAA AGTTACTTTC CTGATGAAAA TGAATTTATG
GTCGATGATG AGCCTAAATT GGATGCTAAC GAGAAAGGTA TCGTTTCAAA ACCAAGTACA
ACAACGGCTG AGATAGAAAA AGATAAGAAA CCTGATGCTG TCAATTTTAG CCAAACAAAG
ATGGATGGCA GTGCTAAGTT TTAA
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| Protein sequence | MDWIQVAVTG LVVLLVMVCI NFFFANSKQR KVDERKEREA ISYRRALSEA RAAERQERVY
KAQTGHISTQ LFLAKEAEMN NFEEALHWYE MAANHDNAIA IRSVIRLCDS RREDSELKSK
SKFWGQVLAA EEGGAEKKLA LGIAFIQGNG VDANIEKGIA LIDEAAEMEH IPAQLFIADW
YVAEANPQPN AKLAAEWNLR AAMLDNTEAQ IRIGKQYAEG KGVAVDPKKA TYWLELAAES
GDPKAQYFAG EMGADTTEKG NSVAYIWFWL AAANGIEAAA SRRDHVGHLV GVDAVIGLQG
MAKPLHDKMK RGKLRKHAVI KSLDKLYQRQ SYFPDENEFM VDDEPKLDAN EKGIVSKPST
TTAEIEKDKK PDAVNFSQTK MDGSAKF
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