| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I3020 |
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| Symbol | rmlD |
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| ID | 6989117 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 3271747 |
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| End bp | 3272628 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 643381297 |
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| Product | dTDP-6-deoxy-l-mannose-dehydrogenase |
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| Protein accession | YP_002264343 |
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| Protein GI | 209696412 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1091] dTDP-4-dehydrorhamnose reductase |
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| TIGRFAM ID | [TIGR01214] dTDP-4-dehydrorhamnose reductase |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.361116 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGGGTAT TAATTACAGG ATGTTATGGT CAAGTTGGTC ATTGCCTTAC TGCTCAATTA
GTGAATAAAG CAAGCACAAG CGTGCTTGCT TTAGACCGAG ATCAGTTAGA CATCACTAAT
CAAGATGCTG TGAATGCAAT TGCTGATGAT TTTCAACCCA CGATTATTAT CAATGCGGCG
GCGCATACTG CCGTGGATAA AGCGGAAGAC GAAGTGGATT TGTCATACGC GATTAATCGT
GATGGACCTA ACTATTTAGC GCAAGCCGCA CAGCGAGTTG GTGCGGCTAT GTTGCATATC
TCAACCGATT ATGTCTTTGA AGGTAATAAG GTTGGTGAGT ATGACGAGCG TGATGTTACG
CATCCACAAG GCGTTTACGG TGAAAGTAAA TTAGCCGGTG AAAGCGCCGT AGCAAACGCG
TGCGATAAAC ACATTATCCT TCGTACTGCT TGGGTGTTTG GTGAGCATGG TAATAATTTT
GTCAAAACCA TGCTCCGTTT AGGCGTAACT CGAGATGAAT TAAGCATTGT TGGAGACCAG
TTTGGTGGAC CAACGTACGC GGGTGATATT GCCAACGCAT TGATTACTAT CGCAGAGCGC
ATTACCCAAG GTAATATGGT TGATTATGGT GTCTATCACT ATTCTGGTTT GCCTCATGTG
AGTTGGTACG AGTTTGCTGA TGCTATTTTT GATACAGCAA AAGAGCAAGG TGTAATTAAG
ACAAAGCCAA GCTTAACGGG CATCACAACA GTGCAATACC CAACCCCAGC GAAACGTCCA
AGTAACTCTT GCCTAAATAC CAATAAAATC ACAACCGCAT TTTCAATAGA AGCGAGTGAT
TGGCAAACGG CCCTAAAGAA CATACAAGCG TATACAGGAT AA
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| Protein sequence | MRVLITGCYG QVGHCLTAQL VNKASTSVLA LDRDQLDITN QDAVNAIADD FQPTIIINAA
AHTAVDKAED EVDLSYAINR DGPNYLAQAA QRVGAAMLHI STDYVFEGNK VGEYDERDVT
HPQGVYGESK LAGESAVANA CDKHIILRTA WVFGEHGNNF VKTMLRLGVT RDELSIVGDQ
FGGPTYAGDI ANALITIAER ITQGNMVDYG VYHYSGLPHV SWYEFADAIF DTAKEQGVIK
TKPSLTGITT VQYPTPAKRP SNSCLNTNKI TTAFSIEASD WQTALKNIQA YTG
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