| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I3003 |
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| Symbol | |
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| ID | 6988359 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | - |
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| Start bp | 3253913 |
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| End bp | 3254710 |
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| Gene Length | 798 bp |
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| Protein Length | 265 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 643381282 |
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| Product | TatD related DNase |
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| Protein accession | YP_002264328 |
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| Protein GI | 209696397 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0084] Mg-dependent DNase |
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| TIGRFAM ID | [TIGR00010] hydrolase, TatD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0100671 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATAGAAA GAGAATTTTA TTTTAAGGCT TTTATCATGA TAGATACGCA CGCTCATATT
TATGCAAAAG AATTCGATGA CGATCGTGAT GCGGTTGTTC AGCGAGCTTT AGAACAAGGT
ATTAATCAAA TATTACTGCC AAATATCGAT CTAGCATCCA TTGAACCTAT GCTTCAAACA
GAAGCCGCTT ACCCTGACAT TTGCCGCTCA ATGATGGGCT TACACCCTTG CTATGTGAAC
GCCGATGTTA AGCAAACTCT CGCAACTATT CACGCATGGT TTGAGAAGCA CAACTTCATT
GCAGTAGGTG AAATAGGTAT TGACCTATAC TGGGACAAAA CCTTTAAAGC TGAACAAGAG
ATGGCATTTA TCACCCAATT AAACTGGGCA AAAGAGATGA CGTTGCCTGT TGTTATTCAT
ACTCGTGATT CTATTGAAGA AACATTAAGC CTTCTAAAAA AAGAACAGGA TGGCTCGTTA
TCAGGCACAT TCCACTGTTT TGGCGGCTCG GTTGACGAAG CAAAAGCAAT CAATGATCTA
GGCTTTCATT TAGGATTAGG CGGTGTTTCT ACCTTTAAAA ATGGCGGAAT GGATAAAATC
ATTCCTCACT TGAATATGGA TTACTTAATT CTAGAGACCG ATTGCCCATA TTTAGCACCA
GTACCACACC GTGGTAAGCG TAATGAGCCA GCGTACACAC AATTAGTCGC GCAACGTGTG
GCTGATTTAC GTGAAATGAG CTTGGCCGAT GTCGATGCGA TTACGACGAA AAATGCGAAA
AGACTTTTTG AGATTTAA
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| Protein sequence | MIEREFYFKA FIMIDTHAHI YAKEFDDDRD AVVQRALEQG INQILLPNID LASIEPMLQT
EAAYPDICRS MMGLHPCYVN ADVKQTLATI HAWFEKHNFI AVGEIGIDLY WDKTFKAEQE
MAFITQLNWA KEMTLPVVIH TRDSIEETLS LLKKEQDGSL SGTFHCFGGS VDEAKAINDL
GFHLGLGGVS TFKNGGMDKI IPHLNMDYLI LETDCPYLAP VPHRGKRNEP AYTQLVAQRV
ADLREMSLAD VDAITTKNAK RLFEI
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