| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I2920 |
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| Symbol | epsH |
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| ID | 6988451 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | - |
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| Start bp | 3162557 |
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| End bp | 3163153 |
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| Gene Length | 597 bp |
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| Protein Length | 198 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 643381199 |
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| Product | general secretion pathway protein H precursor |
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| Protein accession | YP_002264249 |
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| Protein GI | 209696318 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2165] Type II secretory pathway, pseudopilin PulG |
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| TIGRFAM ID | [TIGR01708] general secretion pathway protein H
[TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAGATAA AACGTGAGGT TGGGTTTACC CTAATCGAAA TAATGTTGGT ATTGGTGCTG
CTGTCGGTAA GTTCGATGGC GGTCATCATG AGCTTACCTG AAAGTCGAGA TGATCATCTT
GAAGAGCAGG CCTCACGTTT TTATCAGTTA GTTCAGCTTC TCAATGAAGA TGCTTTACTC
AACGGGATGG ATTACGGCAT CTATTTCAAT CAAGAGCGAC AAGAATATCG CTTTATGACA
TTGACATCAG ATGGCTGGCA GCCTCTTGAG AAAAGTCGCT TTTTTACTGA AGTGAAAATA
GAAAAAGACA TCGAATTTGA GATGGAGTTA GGCGGTTCCG CATGGGCTGA CGACGATCGC
TTATTTGAAC CGGGTTCTTT GTTTGATGAA GACATGTTCG CGGATGTCGA GAAAGATAAA
AAACCGAAAC CGCCGCAAGT AATGGTGTTA TCAAGTGGTG AAGTGACCCC ATTTTTATTT
CGCCTTTTTC CTGCGAAGGT AAGTGGAAAC CTTGATAATC AAACGTGGTT AATTAAAGCG
GATGAATCTG GTGTGATCAC GTTGGATAAG CCAGGGGAAG AAGACGATGA AAAGTAG
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| Protein sequence | MKIKREVGFT LIEIMLVLVL LSVSSMAVIM SLPESRDDHL EEQASRFYQL VQLLNEDALL
NGMDYGIYFN QERQEYRFMT LTSDGWQPLE KSRFFTEVKI EKDIEFEMEL GGSAWADDDR
LFEPGSLFDE DMFADVEKDK KPKPPQVMVL SSGEVTPFLF RLFPAKVSGN LDNQTWLIKA
DESGVITLDK PGEEDDEK
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