Gene VSAL_I2832 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVSAL_I2832 
Symbol 
ID6987938 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAliivibrio salmonicida LFI1238 
KingdomBacteria 
Replicon accessionNC_011312 
Strand+ 
Start bp3070724 
End bp3071356 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content41% 
IMG OID643381109 
ProductDNA polymerase III subunit epsilon 
Protein accessionYP_002264166 
Protein GI209696236 
COG category[L] Replication, recombination and repair 
COG ID[COG0847] DNA polymerase III, epsilon subunit and related 3'-5' exonucleases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCAAC TTCAACGCCT ATGGTGGCGC TATAAACTAC GAAACCACTC GAATCACTTT 
CTTTTTGAAC GCTACAACGG CGAAGAATTG GTTTCTATTG ATTGCGAAAC AACAAGTCTT 
GACCCTAATC ATGCGGAATT AGTGTCGATC GCGGCCATAA AAATAAAACA GAACAGAGTA 
TTAACAAGCC AAACGATTCA TCTCAAATTA AGACCACCAC ACAACCTAAC GTCAGAATCA 
GTCAAAATAC ATCAACTAAG GCATCACGAT CTCTCTCATG GACTGTCCGA AAAAGACGCT 
ATCATTCAAT TACTTCAATT TATTGGTAAT CGACCGATTG TCGGCTACCA CATTCACTAC 
GACAAAAAGA TTTTAGACCG CAGTTGCTTA CGTCACTGTG GTCACCCTTT TCCTAATAGG 
CTAATCGAAG TCTGCCATAT TTATCACCAT AAATTAGAGT GCCTATTACC TAATGCGTAT 
TACGATTTAA GCATTGAGGC CATCTCTACC CATTTAGATC TACCACAAGC CGAACGTCAT 
GATGCTTTGC AAGATGCCAT TGCCGCAGCA TTGATTTATG TTCGTCTTCA TTATGGTGAT 
TTCCCTGAAC TGCCTACCCC AAGAGCGCTT TAA
 
Protein sequence
MNQLQRLWWR YKLRNHSNHF LFERYNGEEL VSIDCETTSL DPNHAELVSI AAIKIKQNRV 
LTSQTIHLKL RPPHNLTSES VKIHQLRHHD LSHGLSEKDA IIQLLQFIGN RPIVGYHIHY 
DKKILDRSCL RHCGHPFPNR LIEVCHIYHH KLECLLPNAY YDLSIEAIST HLDLPQAERH 
DALQDAIAAA LIYVRLHYGD FPELPTPRAL