| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I2820 |
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| Symbol | |
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| ID | 6988266 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 3053485 |
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| End bp | 3054483 |
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| Gene Length | 999 bp |
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| Protein Length | 332 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 643381097 |
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| Product | hypothetical protein |
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| Protein accession | YP_002264154 |
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| Protein GI | 209696224 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGATGTGC GTATGACAGC GTTTTTCACT TCTCATTTTG ATTCACAAGA CAACATTATT
GACCTATCAA AATGGCAAGA ACTTGCAGAT TTAATTGTTG ATATTTTTGG GGCCGACTGT
GGTGCCGTTA TCGAATTTAC AGGTCATTCT TTCCATACCC TTATAAGCAG CAATAATAAA
ACAAATTTTC TTCGCCAAGG TTCTGAATGG CCTAGTGACA GCAAAAGCTT TTGTCGTGCC
ATTGTAGAAA CAGGCAAAGA GTTATATGTA CCTGATGCGT TAAAGAACGA ATATTGGATT
AATGCCCCAG CAGTTGAAGA TGGCCCAGTA AGATCTTATT GTGGTGTTCC TGTCTTTCAC
CCTGATGGCT CTATTTATGG CACTATTTGT GCGATAGATA CAAAGCATAC TAATTATAAA
AGTGCATTAG TTAAGCTACT GCATCACCTG TCAAAGCTCA TTACGGCTGA TTTGAAAATG
GCAGAAGAAG CTGAGCAACA TCGACAAATG GCACTTACCG ATTCAATGAC AGGGTTACTT
AATCGTCGTG GATTAGACAT TCTAGGTAAG CAGAAATTAA AAGATTCAAA AAGGTACCAA
GATAATATTG GCATCCTATA TTTTGATATT GATAATTTAA AACAAGTAAA TGACAACCAT
GGCCACGAAT TCGGAGATCA ATGCATTCAA CTATTGGCCA ATATTTTAAA AAGCACAATC
AGAGAATCCG ATTTAACCGC TCGTACTGGC GGGGATGAAT TTATTGTTTT AGCCTTGCTG
AATAAGGAAA ACGACAATGA ACTTGCCTTA CTCGCAGAAC AAATCCGCCA ACGTTACCAA
GAAAAAACGA TGCATCAACC AGGCTTAAAC CTCACCAATA TTAGTATTGG TCGTCATCTT
GAACCTTATG ATTCAGTACT ATCACTTAAA GACATGTTCA TTAATACAGA TACCGCTATG
TATAAAGAAA AAGATCAAAA AAAAGCCACC AGTAAATAA
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| Protein sequence | MDVRMTAFFT SHFDSQDNII DLSKWQELAD LIVDIFGADC GAVIEFTGHS FHTLISSNNK
TNFLRQGSEW PSDSKSFCRA IVETGKELYV PDALKNEYWI NAPAVEDGPV RSYCGVPVFH
PDGSIYGTIC AIDTKHTNYK SALVKLLHHL SKLITADLKM AEEAEQHRQM ALTDSMTGLL
NRRGLDILGK QKLKDSKRYQ DNIGILYFDI DNLKQVNDNH GHEFGDQCIQ LLANILKSTI
RESDLTARTG GDEFIVLALL NKENDNELAL LAEQIRQRYQ EKTMHQPGLN LTNISIGRHL
EPYDSVLSLK DMFINTDTAM YKEKDQKKAT SK
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