Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I2679 |
Symbol | |
ID | 6987871 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | + |
Start bp | 2901363 |
End bp | 2902124 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 643380949 |
Product | putative ion transport protein |
Protein accession | YP_002264017 |
Protein GI | 209696087 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0253286 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAATCATA CCAAAATTGA CCTTAAACCC ATGAGCTTAA TGTCACTGAT ACTGTCGTTT TTATCATTAA TTGTGATCTC AAGCTTGCTG TTTCTACCAC TAAATAGTGC CAGTAAAGCA ATGTTGATTG GTATCGACAC CACCATCTGT GCCTTGTTTC TTCTGCAATT AAGTATTGAT TTACTTAGAA GTCAAGATCG TCGTCAATAT ATGAAAGATC ATTGGATCGA TTTTATTGCC AGTATTCCGA TCATTGAACC CATTCGATAT GCCCGAATTT TTCATATTTT AAGAATATGC CGACTTTTCC GATCCAGTCA ATCCGTCTTA AAACAGATTA AGAAAAACCG AAAAGAAGCC ACTATTGCTT CTATTCTTGT GTTGATGGTG ACATTAATTT CGCTTGGCTC TGTCTTTATG CTTGTATTTG AAGGGCAAAA CCCGAATGCA AACATACAAA CCGCAGGAGA TGCGATATGG TGGGCTTTTG TGACAATATC AACCGTCGGT TATGGTGATC ATTATCCTAT TACTGTTGCG GGAAAAATAC TGGCCGTTTT TATCATCATT TCAGGCGTTG GGATCTTTGG TATGATTTCA GGTTTAATTA CCTCCATAAT TACAGAGCCT GAAAAAGTCA GAGAAAAGCA TATGCACGAG CAAGAGCAAA TAGTACGAAG CCAAAAGCTT GATTTGCTCC TCCAGCAACA AACCGAAATT TTAGAACGAC TTAATCAAAT CGAAAATAAC AAAGAGAAGT AA
|
Protein sequence | MNHTKIDLKP MSLMSLILSF LSLIVISSLL FLPLNSASKA MLIGIDTTIC ALFLLQLSID LLRSQDRRQY MKDHWIDFIA SIPIIEPIRY ARIFHILRIC RLFRSSQSVL KQIKKNRKEA TIASILVLMV TLISLGSVFM LVFEGQNPNA NIQTAGDAIW WAFVTISTVG YGDHYPITVA GKILAVFIII SGVGIFGMIS GLITSIITEP EKVREKHMHE QEQIVRSQKL DLLLQQQTEI LERLNQIENN KEK
|
| |