Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I2577 |
Symbol | |
ID | 6987827 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | + |
Start bp | 2776248 |
End bp | 2777234 |
Gene Length | 987 bp |
Protein Length | 328 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 643380845 |
Product | ABC-type [(GlcNAc)2] transporter, permease protein |
Protein accession | YP_002263923 |
Protein GI | 209695993 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGATTTT TTCTAAGACG TTTATCGTTC TATTTTATTG CGTTGGTCGT TGCTGCAACG ATTAACTTTA TTATACCGCG AGCAATGCCA GGTGACCCAG TTACCATGAT GTTCGCGAAT GCGACTACTC AGGTAACTCC TGAGCGTATA GAAGCTATGA AACAACTACT TGGTTTTGTT GATGGGCCTC TTTATCAGCA ATACTTTATC TATATTAAAA ATATCCTAAC TTGGGAATTA GGTACTTCAA TTAAATTCTA CCCTCTAAGT GTAAATACAC TATTAGGTGG TGCATTTGGT TGGTCTCTTT TCTTGGCGGG TACTGCGGTT GTTCTATCTT TCTCTCTAGG TTCTATATTA GGTATTTTTG CGGCTTGGAA ACGAGGCAGC GCTTATGACA CATTTATCTC TCCTGGGATG TTGGTTATCC AAGCGGTACC ACAAGTAGTT ATTGCGATGC TTGCCATGTT TACTTTTGCC GTGGGATTAA AATGGTTCCC CACAGGTTAT GCATATACAC CAGGTAATAT TCCCGACTGG ACTAGCTGGG CATTTATTAA AGATGTCGCT TACCACGCTA TTCTTCCTTT GTTGTGTGCA TCAATAGTTC AAATTGGTGG CTTCCTGATA AACATGCGTA ACAACATGAT TAATCTGCTT GGTGAAGACT ACATCACCAT GGCAAAAGGC AAGGGATTGA GTGAAAACAG AGTGGTATTT AACTACGCTG CTCGTAACGC AATGCTACCA AGCGTTACTG CTTTATCAAT GTCTTTAGGT ATGGCTATTG GCGGTCAACT TATTGTTGAA ATCATTTTTA ACTACCCGGG TCTTGGCTCT GTATTATTCA ACGCCATTAA TTCTCGAGAT TACCAAGTAC TTCAAGGTCA GCTATTAATC ATGACTCTGT TTATGCTCTT CTTTAACCTT CTTGCAGACA TGTTATACGT TGTTCTAGAC CCTCGCTTAC GCAAGGGAGG AAAATAA
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Protein sequence | MGFFLRRLSF YFIALVVAAT INFIIPRAMP GDPVTMMFAN ATTQVTPERI EAMKQLLGFV DGPLYQQYFI YIKNILTWEL GTSIKFYPLS VNTLLGGAFG WSLFLAGTAV VLSFSLGSIL GIFAAWKRGS AYDTFISPGM LVIQAVPQVV IAMLAMFTFA VGLKWFPTGY AYTPGNIPDW TSWAFIKDVA YHAILPLLCA SIVQIGGFLI NMRNNMINLL GEDYITMAKG KGLSENRVVF NYAARNAMLP SVTALSMSLG MAIGGQLIVE IIFNYPGLGS VLFNAINSRD YQVLQGQLLI MTLFMLFFNL LADMLYVVLD PRLRKGGK
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