| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I2427 |
|---|
| Symbol | rpsB |
|---|
| ID | 6987746 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Aliivibrio salmonicida LFI1238 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011312 |
|---|
| Strand | - |
|---|
| Start bp | 2597330 |
|---|
| End bp | 2598061 |
|---|
| Gene Length | 732 bp |
|---|
| Protein Length | 243 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 643380697 |
|---|
| Product | 30S ribosomal protein S2 |
|---|
| Protein accession | YP_002263781 |
|---|
| Protein GI | 209695851 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0052] Ribosomal protein S2 |
|---|
| TIGRFAM ID | [TIGR01011] ribosomal protein S2, bacterial type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.0204898 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAACTG TATCAATGCG CGATATGCTT AAAGCTGGTG TTCACTTCGG TCACCAAACT
CGTTACTGGA ACCCAAAAAT GAAGCCATTC ATCTTTGGTG CTCGTAATAA AGTTCATATC
ATCAACTTAG AAAAAACGGT ACCAATGTTC AACGAAGCTT TAGCAGAACT TGCTAAAATC
GGTAACAAAA AAGGTAAAGT TCTTTTTGTT GGTACTAAGC GCGCTGCATC TGAAGCTGTT
AAAGAAGCTG CAATCAACAG TGACCAGTAC TACGTGAACA ACCGTTGGTT AGGCGGCATG
CTTACTAACT TTAAAACTGT TCGCCAATCT ATCAAGCGTT TAAAAGAATA CGAAGTGCAA
GCTCAAGATG GTACTTTCGA GCAAATCACT AAGAAAGAAG CGCTAATGCG TACGCGTAGC
ATGGAAAAAC TAGAGAAATC TCTAGGTGGT ATCAAAAACA TGAACGGTCT TCCTGACGCG
TTATTTGTTA TCGATGCTGA TCACGAGCAC ATTGCAGTTA AAGAAGCAAA CAACCTAGGT
ATCCCAGTAT TTGCTGTTGT TGATACTAAC TCAAACCCAG ATGGCGTTGA CTACATTATC
CCAGGTAACG ATGACGCAAT CCGCGCTATC CAACTTTACC TGAACGCTGC TGCTGATTCT
GTAAAGTCTG GTCGTAACCA AGACGTTGCA GCTGCTGTAG CTGAAAAAGA CGGTTTCGTA
GAAGCTGAGT AA
|
|---|
| Protein sequence | MATVSMRDML KAGVHFGHQT RYWNPKMKPF IFGARNKVHI INLEKTVPMF NEALAELAKI
GNKKGKVLFV GTKRAASEAV KEAAINSDQY YVNNRWLGGM LTNFKTVRQS IKRLKEYEVQ
AQDGTFEQIT KKEALMRTRS MEKLEKSLGG IKNMNGLPDA LFVIDADHEH IAVKEANNLG
IPVFAVVDTN SNPDGVDYII PGNDDAIRAI QLYLNAAADS VKSGRNQDVA AAVAEKDGFV
EAE
|
|---|
| |