Gene VSAL_I2294 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVSAL_I2294 
Symbol 
ID6988530 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAliivibrio salmonicida LFI1238 
KingdomBacteria 
Replicon accessionNC_011312 
Strand+ 
Start bp2468734 
End bp2469408 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content41% 
IMG OID643380572 
Productputative type IV pilus assembly (PilZ) protein 
Protein accessionYP_002263656 
Protein GI209695726 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTGGTG TTTCTCTAAG CACGAATCAA AATGTACTAA ATAAAATGGA TATTGGAGGA 
AGAGTGATCA TTGAGGTGAG CTGCCCAAAT GGGCAATCCG CTCAAGCCAC CTCGACGTTA 
ATTGGGTTTA AAAAAGGCCA ATACATCTTT ATTGAATACC CTTCATCAAC CTCTTTAGAA 
TTTAATAAGA TTTATTTGGA AGGCGCGGAA GTCACCTTTA GAGCAATGAC AAACACCACA 
TTGCGTGATG TTATTGCGTT TCGAACACAG ATCCACTCCG TTATTTATCG TCCAATGGAA 
ATGCTTTGTC TGCATGCACC AAAAAGTATC TCGATGAGAC AAATACGTAC ACATCAGCGT 
ATTGAAACCG AATTTGAGTG TGAACTTACG GTTGGTAACC ATGTACTGTC AGGTAAGATA 
AGTGACTTTT CAGCAGGAGG GTGTGCGGTA CTCTTTCCGT CAAAATTAAA TCCAGACAAT 
CTTCTTAATC AACCCGTTAG TGTCTCGATT CAATTAGATA CGTTAGAGCC GATCCTCATT 
AAAGGGAAGA TAAAGAATAT AGACGCGAAG GAGAAAAAGT CGAAAGTGGG CGTGATGTTC 
AATGCGGATA GCATTACTGA TTCCGATCTT CAGACCCTTC ATCACCAATG CGTATTAAAA 
GGGTGGGAGT TGTAG
 
Protein sequence
MTGVSLSTNQ NVLNKMDIGG RVIIEVSCPN GQSAQATSTL IGFKKGQYIF IEYPSSTSLE 
FNKIYLEGAE VTFRAMTNTT LRDVIAFRTQ IHSVIYRPME MLCLHAPKSI SMRQIRTHQR 
IETEFECELT VGNHVLSGKI SDFSAGGCAV LFPSKLNPDN LLNQPVSVSI QLDTLEPILI 
KGKIKNIDAK EKKSKVGVMF NADSITDSDL QTLHHQCVLK GWEL