Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I2272 |
Symbol | vacJ |
ID | 6987694 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | - |
Start bp | 2447622 |
End bp | 2448407 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 643380550 |
Product | lipoprotein VacJ precursor |
Protein accession | YP_002263634 |
Protein GI | 209695704 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2853] Surface lipoprotein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00759989 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTATAAAA AAATATGTTT TTCTTGGGTG CTACTTTTTG TTATCACGGG GTGTTCTCAA ACACCTGAGT CGATTGATCC TGAAATAGAA ACCAATGAGG CTGTCGAAGT TGAATACGAT GACTCGCATG ATGGTGACCC AATTGAAGGG TTTAACCGAG TTATGTGGGA TCTTAACTAT AATATTTTAG ACCCTTACTT AGTTCGTCCG GTATCTATTG CCTATGTTGA TTATACGCCA AGCCCAATTC GAATCGGGAT CGCAAATTTC TTAGCGAACT TAGATGAACC CTCAAGCATG GTAAATAATT TGATTATGGG GAATGGTGAG CAAGCAATGG TGAATTTCAA TCGATTTTGG TTGAACACAA CACTAGGTCT TGTTGGACTT ATTGATATTG CCAGTGCTGC TGAGATTCAA AAACCAGACA GTCGCTCTTT TGGGGATGCA TTAGGTTATT ATGGTGTCGG TAACGGGCCT TACTTTATGT TACCTGGTTA TGGTCCATGG ACATTGCGTG AAGCTGGTGA TTTTGTTGAT GGCTTATACA TGCCGTTATC GTATTTAAAC TTTTGGCAAG GTTTAGGTAA ATGGGGATTA GAAGGCATGG AGTCACGAGT TGGTTTAATA TCTCAAGAGC CAATGCTAGA AACGTCACCC GATCCCTACG TATTAACCCG TGATGTTTAT TTACAAAGAC AAGATTTTAA AGCAGAAATA GAACCAGAAA GTGATAGTAA TTCAGAAGAA GACTTAAATG ACTTCTTAGA TGAAATTGAT GAATAA
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Protein sequence | MYKKICFSWV LLFVITGCSQ TPESIDPEIE TNEAVEVEYD DSHDGDPIEG FNRVMWDLNY NILDPYLVRP VSIAYVDYTP SPIRIGIANF LANLDEPSSM VNNLIMGNGE QAMVNFNRFW LNTTLGLVGL IDIASAAEIQ KPDSRSFGDA LGYYGVGNGP YFMLPGYGPW TLREAGDFVD GLYMPLSYLN FWQGLGKWGL EGMESRVGLI SQEPMLETSP DPYVLTRDVY LQRQDFKAEI EPESDSNSEE DLNDFLDEID E
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