| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I2049 |
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| Symbol | |
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| ID | 6987542 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | - |
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| Start bp | 2194501 |
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| End bp | 2195376 |
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| Gene Length | 876 bp |
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| Protein Length | 291 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 643380337 |
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| Product | mechanosensitive ion channel |
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| Protein accession | YP_002263426 |
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| Protein GI | 209695497 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3264] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.492316 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTTCGTT TATTTATTCT CGTACTTACA TTAAGCTTTG GATCGAGTGC TTTTGCTGAA
GATCCTCAAT CTATCGGCAA CCTGCATCAA TTCGCGAGCC TTATTCGTTG GAGTGGTGTT
GCTTTCTCAT TCCTTATTGT TATCGCCGCT TGGTTATTTC TTCGTTTTAT CCAATCGATT
GTGGATGGAA TAAGTAACCA GTTTGCTCAA CGACGTATGT TGATGCAAAA GCTGCAATCC
TTCTTCCAAT TTTTTATCTA TATGTCGACA GGTATGACGG TGTTCATGCT CAGTTTCCGT
GTTGATGAAA GAGTGTTAGC CTTAATCGGT GGTACTCTCG CCGTTTCTGT TGGTTTCGCA
TTAAAAGATC TCACGGCCTC TTTTATTGCA GGCTTAACCA TTATGATTGA TCGACCTTTT
CAAGTGGGCG ACCGTGTCAC GTTCGAAGGA CACTATGGTG ATATTATTGC TATCGGATTA
CGCTCCGTAC GCATGCAAAC ACTTAATGAT GACATCATCA CCATCCCAAA CAATAAATTC
TTAAATGAAG TCGCTATTAG TGGTAATTAT GGTGCTTTGG ATATGCAAGT CGTCATCCCT
TTCTATATCG GAATGGATCA AGACATTAAT GCGGCCCGCG ATATTATTCA AGAAGCAGCT
TCATCAAGTC GTTATATCCA CTTACCAAAG CCTGTTGTTG TACTAGTAAA ACAAACCATT
ACTGAAAATT ATTTGGGCAT TCAACTAACT TGTAAGGCTT ATGTGGTTGA TATTAAGTTT
GAGAAATTAT TTGAAACCGA TATTACATTA CGCGTAATGC AAGAATTTAG AAAAACAGAT
ATCTACCCGC CAACAATATC TATCCAAAAC AAATAA
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| Protein sequence | MLRLFILVLT LSFGSSAFAE DPQSIGNLHQ FASLIRWSGV AFSFLIVIAA WLFLRFIQSI
VDGISNQFAQ RRMLMQKLQS FFQFFIYMST GMTVFMLSFR VDERVLALIG GTLAVSVGFA
LKDLTASFIA GLTIMIDRPF QVGDRVTFEG HYGDIIAIGL RSVRMQTLND DIITIPNNKF
LNEVAISGNY GALDMQVVIP FYIGMDQDIN AARDIIQEAA SSSRYIHLPK PVVVLVKQTI
TENYLGIQLT CKAYVVDIKF EKLFETDITL RVMQEFRKTD IYPPTISIQN K
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