Gene VSAL_I1981 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVSAL_I1981 
Symbol 
ID6987492 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAliivibrio salmonicida LFI1238 
KingdomBacteria 
Replicon accessionNC_011312 
Strand- 
Start bp2122929 
End bp2123606 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content37% 
IMG OID643380278 
Productmembrane protein 
Protein accessionYP_002263369 
Protein GI209695440 
COG category[S] Function unknown 
COG ID[COG0398] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAAAA AATTACTCTT ATTAATCACT CTTCTTACAG CCTTTGCTGT TATCTTTTTT 
AACTTTGGTC ATCTATTTAC TCTAGAGCAG GCTAAGGCAT ACCATCAAGC CCTTCAAAGT 
GACATCCAAG AAAACCTTTT CTTTTATAGC GCCCTTTATT TCTTTGGTTA CATTACCGTC 
ACGGCATTAT CAATACCAGG CGCCGCAGTA GTCACATTAC TTGGCGCGGC CTTATTTGGT 
TTTTGGTGGA GCTTATTGTT GGTTTCTTTT GCCAGTTCCA TTGGTGCTAC TATTGCCTTC 
CTAAGCAGCC GTTATTTATT AAGAGAATGG GTTGATCGTA AATTTGGGGA CAAATTAATT 
TCCATCAATC AAGGTATTGA AAAAGATGGC GCTTTTTACT TACTGACTCT TCGTTTAATT 
CCTATATTTC CATTCTTTCT TATTAATTTA GTCATGGGAT TAACAAAACT AACCGCCGCT 
CGGTTTTACT TATTTAGTCA ATTAGGCATG CTGCCCGGAA CCATGGTATT TTTAAATGCC 
GGAACTCAAT TAGCTGAAAT AACCTCACTA TCAGGGTTAA TATCACCAAA TATACTCGGC 
TCTCTTGCTC TTCTTGGTTT ATTTCCAATC GTTGCAAAAT TTATTATTAG TTATGTTCGG 
AAAAAACGCA CCTCTTAA
 
Protein sequence
MNKKLLLLIT LLTAFAVIFF NFGHLFTLEQ AKAYHQALQS DIQENLFFYS ALYFFGYITV 
TALSIPGAAV VTLLGAALFG FWWSLLLVSF ASSIGATIAF LSSRYLLREW VDRKFGDKLI 
SINQGIEKDG AFYLLTLRLI PIFPFFLINL VMGLTKLTAA RFYLFSQLGM LPGTMVFLNA 
GTQLAEITSL SGLISPNILG SLALLGLFPI VAKFIISYVR KKRTS