Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I1972 |
Symbol | |
ID | 6987483 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | - |
Start bp | 2113990 |
End bp | 2114901 |
Gene Length | 912 bp |
Protein Length | 303 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 643380269 |
Product | periplasmic solute binding protein |
Protein accession | YP_002263360 |
Protein GI | 209695431 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0803] ABC-type metal ion transport system, periplasmic component/surface adhesin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTAATA CATTGTTCAC AATACCAGTA TTAGCCCTCA CTCTAGGGCT TAGCCACTCA GCCATCGCGT CAGAGCAAAT GCCAGTGATC ACTAGCTTTT CTATTTTAGG CGATATCGTA TCTCAAATAG GAGGAGACCA TATTGCGATA ACTAATCTAG TCAAAGCCAA TGGGGATGCC CATGTTTATC AACCAACCCC TATTGATGCA AAAGAAATTT CACAGGCGAA ATTAGTCATT ATGAATGGCT TGGGATTTGA AGGTTGGATG CCTCGTTTAA TCGAATCCTC CAATTTTAAA GGAATCGAAA TCATTGCATC AAATGGAATA ACGCCGTTAA CAAGGGAGGA GGAAGATCAT CATCATGAAA CTGATCATCA ACATGGAAAC TACGACCCAC ATGCATGGAA CAGTGTTAAA AATGTGAAAA TTTACGTTAA AAATATAGAA GCGGGATTAA TCAAAGCGGA CCCTAAAAAC AGCAATGATT ATAAGAGAAA TGCAGATAAT TATTTACAAA AACTGGATAA GCTAGAGATC ACCATTCATC AAGAATTGGA TCAAATACCA CAATCCAAAA GAACCATAAT CACACCGCAT GATGCATTTG GTTATTTTTC TCGCGATTAC AATGTCACGT TCTATGCACC TCAAGGAACA AGTACCGAAT CGGAAGCCAG CGCTGCGGAT GTTGCAACCA TAATTCGACA AATAAGAAAG GACGATATCC AAGCCGTCTT TATCGAAAAT ATTACTGATA ACAGAATGAT CGAACAAATA AGTAACGAAA CACACGCTCA CATTGGTGGA AAGCTGTATT CAGATGCACT TTCAGGCCCC GATGAGCCCG CAACAAGCTA TATAAAACTA ATGCAGCACA ATGTAAATAC CATTACTCAA GCCCTAAAAT AA
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Protein sequence | MSNTLFTIPV LALTLGLSHS AIASEQMPVI TSFSILGDIV SQIGGDHIAI TNLVKANGDA HVYQPTPIDA KEISQAKLVI MNGLGFEGWM PRLIESSNFK GIEIIASNGI TPLTREEEDH HHETDHQHGN YDPHAWNSVK NVKIYVKNIE AGLIKADPKN SNDYKRNADN YLQKLDKLEI TIHQELDQIP QSKRTIITPH DAFGYFSRDY NVTFYAPQGT STESEASAAD VATIIRQIRK DDIQAVFIEN ITDNRMIEQI SNETHAHIGG KLYSDALSGP DEPATSYIKL MQHNVNTITQ ALK
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