Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I1590 |
Symbol | qnr |
ID | 6987217 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | - |
Start bp | 1699484 |
End bp | 1700140 |
Gene Length | 657 bp |
Protein Length | 218 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 643379922 |
Product | quinolone resistance determinant QnrC |
Protein accession | YP_002263022 |
Protein GI | 209695093 |
COG category | [S] Function unknown |
COG ID | [COG1357] Uncharacterized low-complexity proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0160927 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTAAAT ATAATGAAAT ATTCGATAAC GTGGATTTTT CGAAACAAGA TTTAAGAGAA TCCTATTTTG AAGGGTGTAA GTTTTATCGA TGTGATTTCA ATCGAACCAA TCTGAGAGAC TCCCGATTTG TTGATTGTGT TTTTATCGAA CAGGGGGCAA TTGAAGGTTG TCATTTTGAT TACAGTGACT TAAGGGACGC ATCATTTAAA CGCTGTCGCT TAACCATGTC TAATTTTAAA GGCGCAAATT GCTTTGGTGT CGAATTTAGA GAGTGTGATT TAAAAGGAGC TAATTTTGTT CAAGCCAGTT TTGTTAATCA AATAAGTCAT CAAATGTATT TCTGCTCTGC TTATATTACG GGGTGTAATT TGTCTTATGC GAATTTTGAA CGCCTATGTA TCGAGAAATG TGACTTGTTT GAGAACAAAT GGAACGGAGC TAATTTACAA GGGGCATCTT TTAAGGGTTC GGACCTTTCT CGTGGCGCAT TCTCTGAAGA CTCGTGGGGT CAATTTAGAA TGCAAGATGC AAACTTATGT CATTGTGAAT TGGATGGTTT AGATCCCCGT AGAATTGATT TAACCGGTGT TAAGATCTGT GCATGGCAAC AAGAGCAATT ATTAGAGCCA TTAGGATTAG TGGTACTGCC TGACTAA
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Protein sequence | MAKYNEIFDN VDFSKQDLRE SYFEGCKFYR CDFNRTNLRD SRFVDCVFIE QGAIEGCHFD YSDLRDASFK RCRLTMSNFK GANCFGVEFR ECDLKGANFV QASFVNQISH QMYFCSAYIT GCNLSYANFE RLCIEKCDLF ENKWNGANLQ GASFKGSDLS RGAFSEDSWG QFRMQDANLC HCELDGLDPR RIDLTGVKIC AWQQEQLLEP LGLVVLPD
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