| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I1460 |
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| Symbol | |
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| ID | 6987110 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 1579165 |
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| End bp | 1579944 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 27% |
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| IMG OID | 643379805 |
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| Product | HTH-type transcriptional regulator, AraC family |
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| Protein accession | YP_002262905 |
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| Protein GI | 209694976 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.133338 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGTTTAAAG CTTTTAGCTA TAAAGCAAAA GAAGTTCAAA AGTTAAAAGA CGTTGTAATA
ATTAATCCAT GTATTATTTG GGTCCTTAGT GGTATGAAAA ATATATCTCT TGGTCGGTAT
AAATATAACC TGAAAAATGG GGATGCAATA CTTCTTGGGG CTAATAGTAA ACTGAATTTT
GAAAATATCC CCATAAACGG TTTGTTTTTT TCTAAGCAAA TAATATTTTT TAAACCACCA
AAAGTTGAGT TCTTTAAACA AACAGTAAAA AATTTTGAAG TTTCTAAATA TAGAAATATT
AAACTAGATT ATCAATTGAA AATGACTTTA GACTTACTTC ATCAATCTGA TGTTATTTTA
AAGAATATAA ATACAAGACA TATGTGGTTA GATGGATTAT ATCTATTATT AGCAGAGGAA
TATTATCTTC AAGTACTATT TTTATCTTCT GAAGGCAGTT TTAATGAAAA AGTGTATGAA
GTTTTAGAAA AAATGCAACC TAGTGATCAT AAAATAGAAA ATGTATGTTC AATTTTAGGT
GTAAGTAAAG CAACACTTAT TAGACGATTG AAGAAAGCTG GAACTCAATT TAAGAAAATA
GTAAGACAAG TTAGAATGAA TAAAGCCTTA TTTCTTATGC AAAAAAGAGA GCTTCTTTTA
GAAGATATAT CTTTTTCTTG TGGTTATCAA TCAGTAGAAC TTTTAGTCGT GTATTTTAAA
GAGGAGTTTG GCATCACACC AAAAGAATAT TCCATTTCTT TCAAAGATGT TCAAATGTAA
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| Protein sequence | MFKAFSYKAK EVQKLKDVVI INPCIIWVLS GMKNISLGRY KYNLKNGDAI LLGANSKLNF
ENIPINGLFF SKQIIFFKPP KVEFFKQTVK NFEVSKYRNI KLDYQLKMTL DLLHQSDVIL
KNINTRHMWL DGLYLLLAEE YYLQVLFLSS EGSFNEKVYE VLEKMQPSDH KIENVCSILG
VSKATLIRRL KKAGTQFKKI VRQVRMNKAL FLMQKRELLL EDISFSCGYQ SVELLVVYFK
EEFGITPKEY SISFKDVQM
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