Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I1286 |
Symbol | |
ID | 6986966 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | - |
Start bp | 1396332 |
End bp | 1397294 |
Gene Length | 963 bp |
Protein Length | 320 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 643379650 |
Product | hypothetical protein |
Protein accession | YP_002262749 |
Protein GI | 209694821 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00430498 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTTTGATT TATCACGTAT TTCGGGTTTC GAAAACGCAT CAATTCGCCA GACTGACACT TTACAAATCT TATGGGGCGG TTATGGTGAA TTGGTGCGTT TGCATTTAAC ACAAGCTCCA ACCTCTTCTA TCATCATCAA ACAGATGACC TTACCCAAGC CTAAAGTGCA TCCTAGAGGG TGGAATACTG ATCTCTCACA CCAACGTAAA CTCAACTCCT ACCAAGTAGA ACTCAATTGG TATCAAACTT ACGCCAATTC GGTTTCTACC CATTGTCCTG TACCGCGCTG TTTATACGTA GAGCAGCGTG ATAACGAGCT GATCTTAGTA TTGGAAGATT TAGCGACCTG CGGATTTCCA ATCGTAAAAA CAAACGCCTC TATTAATGAA GCTAAAGCCT GCTTAACGTG GCTTGCGAAC TTTCATGCTG AACACATGAA TGTTGAACCG ATTGGATTAT GGCAAACAGG CACTTACTGG CATTTAGATA CGCGACCTGA TGAGTTTGAA GCCTTAACGG ATTTACCCTT AAAGCAAGCG GCAGTTAAGA TTGATGAAAC ACTAAAAAAC ACCCGTTACC AAACCTTAGT TCATGGTGAT GCTAAGTTAG CGAACTTCTG TTTTTCTGAA GGTGGTAATC AGGTGGCTGC GGTTGATTTC CAATACGTAG GTAAAGGCTG CGGGATGAAG GATGTGATCT TGTTTATCAG CAGTGCGGTT ATGCCAGAAC AATGTGCAGA GCTTGAGAAC GAATTATTGG ATAATTACTT TAGCCAACTT AAAGCCTCCC TATTGCGTTT AGGGCGCACC GAGGCAAGTG ACGATATTGA GCAAGAATGG CGACCACTTT TCAGTGTTGC TTGGGCTGAT TTTCAACGCT TTGTAAAAGG CTGGAGCCCA GAGCATTGGA AGATTAATGG GTATACTGAG GGACTTAAAG AAAGAGCGTT GAAGGGTTTG TAA
|
Protein sequence | MFDLSRISGF ENASIRQTDT LQILWGGYGE LVRLHLTQAP TSSIIIKQMT LPKPKVHPRG WNTDLSHQRK LNSYQVELNW YQTYANSVST HCPVPRCLYV EQRDNELILV LEDLATCGFP IVKTNASINE AKACLTWLAN FHAEHMNVEP IGLWQTGTYW HLDTRPDEFE ALTDLPLKQA AVKIDETLKN TRYQTLVHGD AKLANFCFSE GGNQVAAVDF QYVGKGCGMK DVILFISSAV MPEQCAELEN ELLDNYFSQL KASLLRLGRT EASDDIEQEW RPLFSVAWAD FQRFVKGWSP EHWKINGYTE GLKERALKGL
|
| |