Gene VSAL_I1272 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVSAL_I1272 
SymbolsanA 
ID6986954 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAliivibrio salmonicida LFI1238 
KingdomBacteria 
Replicon accessionNC_011312 
Strand- 
Start bp1381019 
End bp1381696 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content37% 
IMG OID643379638 
Productvancomycin resistance protein SanA 
Protein accessionYP_002262737 
Protein GI209694809 
COG category[S] Function unknown 
COG ID[COG2949] Uncharacterized membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.732001 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGATCC TTTTTCCTTC AAAATTAAAA AAATGGCTGA AAATTATTCT ATTAGTGAGT 
GGCATTTTTG TTGCCATCGT ACTGTTAATG GACCTTTATA TTTCCTTATC AACTCAATCG 
CAGCTGTATG ACGATATTCA GGCGCTTCCA ACTCAAGAAA CCGCATTGGT CTTAGGGACA 
AGTAAGTACA TCCGACGAAC ACTCAACCCT TATTATCAAT ACCGTATTGA TGCTGCTATT 
GAATTATTTA AACAAAACAA AGTGTCCCAT TTCTTGCTCA GTGGTGATAA TGCCCATCGT 
TCTTATAATG AACCATGGAC GATGAAACGA GATTTACTCA AAGCAGGCGT TCCCGAAGAA 
AATATAACGT TAGACTATGC TGGCTTTCGA ACCTTAGATT CAGTATTAAG AGCCAAAGAC 
ATTTTTGATG TCGAGAGTTT AACGATCGTT ACTCAACAAT TTCATTGTCA GCGAGCTCTG 
TTTATTTCTA ATCACTCAGA TATGGATGCA GTGTGTCTTG TGGTTCCCTC TCCGACAGGG 
TGGGCAAATA CAAAAATTCG CATAAGAGAA GTATTGGCAA GAACCAAAGC AATGCTTGAT 
TTGTATATTT TTAATGTGCA ACCTAAATTC TTAGGCCCTA AAGAACCTAT CCAGCATAAA 
ACTATTCCTG TTGAATAA
 
Protein sequence
MKILFPSKLK KWLKIILLVS GIFVAIVLLM DLYISLSTQS QLYDDIQALP TQETALVLGT 
SKYIRRTLNP YYQYRIDAAI ELFKQNKVSH FLLSGDNAHR SYNEPWTMKR DLLKAGVPEE 
NITLDYAGFR TLDSVLRAKD IFDVESLTIV TQQFHCQRAL FISNHSDMDA VCLVVPSPTG 
WANTKIRIRE VLARTKAMLD LYIFNVQPKF LGPKEPIQHK TIPVE