| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I1135 |
|---|
| Symbol | hisC |
|---|
| ID | 6988663 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Aliivibrio salmonicida LFI1238 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011312 |
|---|
| Strand | + |
|---|
| Start bp | 1238690 |
|---|
| End bp | 1239730 |
|---|
| Gene Length | 1041 bp |
|---|
| Protein Length | 346 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 643379514 |
|---|
| Product | histidinol-phosphate aminotransferase |
|---|
| Protein accession | YP_002262613 |
|---|
| Protein GI | 209694685 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0079] Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase |
|---|
| TIGRFAM ID | [TIGR01141] histidinol-phosphate aminotransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.781134 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAAAAT TAGCTCGTAA ACAAGTTCAA GCCTTGACGC CGTATCTATC GGCTCGTCGT
ATTGGTGGCA GTGGTGATGT TTGGCTTAAT GCTAATGAGT CCCCATTTGA TAATGAGTAT
AACGTAAATT TTACTCGTCT AAATCGTTAC AGTGAGTGTC AGCCTCCAGA ATTGATTAAT
GCTTATGCTG CTTATGCAAA AGTAACAGCA GAGCAGGTGC TGACTTCTCG AGGTGCTGAC
GAGGGTATTG AGTTATTAAT TCGTGCTTTT TGTGAGCCAA ATGAAGACGC GATTTTATAT
TGTCCACCAA CCTATGGTAT GTATTCCATC AGTGCTGAGA CGATTGGGGT TGAGACTAAA
ACAATACCTT TAACATCAGA ATGGCAGCTT GATCTTCCAA GCATTGAACG CAATTTAGAC
AATGTAAAAT TGGTCTTTGT ATGTAGTCCA AATAACCCAA CAGGTAATGT GATTAACCGT
AAGGATATTT TGTCTTTATT AGAGATGACA AAAGATCGTG CGATTGTGGT GATGGATGAA
GCTTATATTG ATTTTTGTAT GGAAGTGTCA ACCGTTGATT TATTGGCGAC ATACCCCAAT
TTAGCCATTT TACGAACGCT ATCCAAAGCA TTTGCCTTAG CGGGATTACG CTGTGGTTTC
ACTCTTGCAA ATAAAGAGTT GATTGATGTG TTATCTAAAG TGATTGCTCC GTACCCTGTT
CCTGTTCCTG TCGCTGACAT TGCAACTCAA GCATTATCAG AAGCAGGTTT AGCCCGCATG
AAATACCAAA TGCTTGATTT AAGCGCCAAC CGTGCTTATT TGCACGCAGG ATTAATGGTA
TTGAATGGAG TTACTGTTCA TGAAGGTTGG GGTAACTATT TATTAGTGCA GTTCTCTGAT
GGCGATGCAG TGTTTAAAGC AGCATGGGAT CACGGCATTA TTTTACGTAA TTCACCAATT
AAAGATTGTG TGCGTATTAG TGTGGGTAAC CGCGAAGAGT GTGAGAAAAC ATTAGGCTTT
ATTCGTAACC AATTAATGTG A
|
|---|
| Protein sequence | MEKLARKQVQ ALTPYLSARR IGGSGDVWLN ANESPFDNEY NVNFTRLNRY SECQPPELIN
AYAAYAKVTA EQVLTSRGAD EGIELLIRAF CEPNEDAILY CPPTYGMYSI SAETIGVETK
TIPLTSEWQL DLPSIERNLD NVKLVFVCSP NNPTGNVINR KDILSLLEMT KDRAIVVMDE
AYIDFCMEVS TVDLLATYPN LAILRTLSKA FALAGLRCGF TLANKELIDV LSKVIAPYPV
PVPVADIATQ ALSEAGLARM KYQMLDLSAN RAYLHAGLMV LNGVTVHEGW GNYLLVQFSD
GDAVFKAAWD HGIILRNSPI KDCVRISVGN REECEKTLGF IRNQLM
|
|---|
| |