Gene VSAL_I1045 details

Gene Information

• Locus tag: VSAL_I1045
• ID: 6986814
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Aliivibrio salmonicida LFI1238
• Kingdom: Bacteria
• Replicon accession: NC_011312
• Strand: +
• Start bp: 1136992
• End bp: 1139064
• Gene Length: 2073 bp
• Protein Length: 690 aa
• Translation table: 11
• GC content: 43%
• IMG OID: 643379430
• Product: tail fiber protein
• Protein accession: YP_002262533
• Protein GI: 209694605

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCGCAAA GTATTATTAC CTTAGCGTTT GAAACCTACA AAGCCCAACA AGAGGCGATT 
GCCGCCCCAA TAGAGTTGAA TGAATTTGTG TTGGCCTTTG TACCCAATCA AGATCCTACT 
CAACCGATTG ATAGAAACGA AGAGTTACCG CCACAACATC AAATTGTGCA TGTTGCTAAT 
GTGACTCAAG GCGGCTTTGT GAACCCAAAC GCGGTGGTGT ATTCCTTAAT TATGGATACA 
CGAATTGGTG ACTTTGAATT CAATTGGGTT GGTCTTCGTA ATAAACAAAG TGGGGTACTT 
GCCTCTATTT TGCATATTCC AACGATTTCA AAATTCAAAT CAGTGCCTGG TGTGCAAAAC 
GGAAACTCAG TCACACGTTC AATTTTGATG AGCTATCAAG ATGCGAAAAA TGCAACAGGC 
ATTACTGTTG ATGCTTCAAC CTGGCAAATT GATTTTACGG CGCGTTTGTT TGGAATGGAT 
GAAGCAGAGC GTTTAGTTAA CCTTGATGTG TTTGGCCAAG CGGCGTTCTT GGCTGATGGT 
TTTAAAGTGA AAAAATCAGG CAGTACTTAT CTTGCAAGTA TTGGTCGTGG TTATGTTGGC 
GGTTTACGTT GCCATTTAGA TAATGAAGTA GCCATTTCAG GGGGGAGCAA CTCAAGTGCT 
ATTTATTTAG ATGCGAGTTG GCAAGGGCTG CTAACAAGCC AGTGGCAAAC GGTCTTTGAA 
ATGAAAGTCA GTAAATCAGC ATTAAGTGAT TATGTTGATG CGGATGGGTA TCAGCATTAT 
GTCACTAAAA TTGCAGACAT CAACTCTGCA GGTAATGTGG TTGATACTCG TCATGTTGAA 
GGTTTTTCTG AGCATTTACG ACACGATGAG CAAGCAACAA AAGCCCAAGC GGAGGCCATG 
ACATCAAGCA TAAACTGGAT TTCTCCACTT CGTTGGAAAG AGGCTTTCTT GTCTCGGTTA 
TCTAACTCGT TTGCTGGAAC AAGAACTGAA TATGCCGCGA GTGAAAAAGC GCTTAGCGAT 
GGATTAAGAA CAAAAGCAAA CTCGTCACAT AAACACGATG CCAGTGATGT GAACTCAGGT 
ATTTTAGCTA AAGAGCGTCT ACCCAATGCA AGTACGGCAG TCAAAGGGGC GGTGCAGCTA 
AACGACACGG TGACATCAAC CTCAACAACA CAAGCATTAA CCGCAAATAA AGGGAAATCA 
ATTTGGGATA GAGCGAATGA AGCGTTAAAT GCGGCCCATG CTAAATGGAC TTATGTCGTG 
GCATCAACCA CAGTGTACGG GGCTACTAAG CTGTCTAGTG CCACTAACTC TACAAGTGAA 
GCTTTAGCCG CAACGTCTGG TGCATTGAAG AAAACCTACG ACCTAGCGGC TAGTAAGATA 
ACAAAGGTTC AAGGGGACTT GTGGTACTGG AAGCGTGGTG AGACAGTAAC TAACTCAACT 
CAACTAAATG GTAAAACAAA TAGCACAGCG GCAACGGGGG GTACGATTGC AGAAAGAGAT 
AGTTCTGGTG ATATTTCTAC ACGTTTATTT CGGTCTAGTT ATCAAGATGA ATCGGTTCCA 
AGTGGCGGTT TAGCGTTTCG TAAATCTACT TCCGATAACT CCATCCGTTT TTGTAATAAC 
ATTGCGGCGA TTAGAACGTG GTTAAGTGTC TATAGTAGAG CTGAAGGTGA TAGCCGCTAT 
GTCGCCCAGT CGCGGGTAAG TAGTTCGACG ACATCAACCT CAACGACTAA TGTTGCCAAC 
TCAGCCGCTG CAAAGGCTGC AATGGATAGA GCCAACGCTG CGTATAACAA AGCAGATACG 
AGTGGAAATA AAGTCTATAC GGGTGATAAT CCAAATAATA TAAACTTCCC TATTGGGCAC 
TTTATAACTG CGTGGGTGTC TTCGTATTAT GGAAGAGATA AACTTAATCA CAGCGTTAAG 
TGTTATTTAA ACAATAATGG GTCCATCGGT ATATATGGAA CAGACTGGTA CGGTCACGCG 
AAAGGAGCAT ACTTGAACGG CACTTGGGGT TATCGCGGAT ACACTGGTTC TCCTGGCAAT 
GTAAACGCTG GTCTGATGCA GAGGGTTTTA TAA 

 

Protein sequence

MSQSIITLAF ETYKAQQEAI AAPIELNEFV LAFVPNQDPT QPIDRNEELP PQHQIVHVAN 
VTQGGFVNPN AVVYSLIMDT RIGDFEFNWV GLRNKQSGVL ASILHIPTIS KFKSVPGVQN 
GNSVTRSILM SYQDAKNATG ITVDASTWQI DFTARLFGMD EAERLVNLDV FGQAAFLADG 
FKVKKSGSTY LASIGRGYVG GLRCHLDNEV AISGGSNSSA IYLDASWQGL LTSQWQTVFE 
MKVSKSALSD YVDADGYQHY VTKIADINSA GNVVDTRHVE GFSEHLRHDE QATKAQAEAM 
TSSINWISPL RWKEAFLSRL SNSFAGTRTE YAASEKALSD GLRTKANSSH KHDASDVNSG 
ILAKERLPNA STAVKGAVQL NDTVTSTSTT QALTANKGKS IWDRANEALN AAHAKWTYVV 
ASTTVYGATK LSSATNSTSE ALAATSGALK KTYDLAASKI TKVQGDLWYW KRGETVTNST 
QLNGKTNSTA ATGGTIAERD SSGDISTRLF RSSYQDESVP SGGLAFRKST SDNSIRFCNN 
IAAIRTWLSV YSRAEGDSRY VAQSRVSSST TSTSTTNVAN SAAAKAAMDR ANAAYNKADT 
SGNKVYTGDN PNNINFPIGH FITAWVSSYY GRDKLNHSVK CYLNNNGSIG IYGTDWYGHA 
KGAYLNGTWG YRGYTGSPGN VNAGLMQRVL