| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I0962 |
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| Symbol | |
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| ID | 6986746 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 1058783 |
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| End bp | 1060183 |
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| Gene Length | 1401 bp |
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| Protein Length | 466 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 643379353 |
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| Product | putative type III restriction enzyme |
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| Protein accession | YP_002262456 |
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| Protein GI | 209694528 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG1061] DNA or RNA helicases of superfamily II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.933569 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGCCTT TACGTCAATG GCAAGCAGAG TGTGTAAAGT TGACGCTAGA GCGTTATGAT
AGTGGGCATC AACACTTTCT TTGTTTAGCT ACCCCAGGAG CTGGAAAATC TGTTATGGCC
GCAGAAGTCG CTTTTAGTCT TTTTAAGGGA AACAAAATTG ATTTTGTGTT GTGCTTTTCT
CCCTCTACAG CAATCTCTCA AGGATTAGAA CAGACCTTTA CTTCACGTTT AAATTGCCGT
TTTGATGGCA TTATAGGTGC TTTAGGAGCA TCTTATACCT ATCAAAACTT ACAATTCTTT
GATGACAAGT TCTGGGAGTT GATAAAGAAA AATCGTGTAT TAGTGGTCTT TGATGAAATT
CATCATTGTG CAGGATCAAG CCTTAAGGAT GCAAATTCCT GGGGAGAAAA AATAATTGAA
AATATTCAAT TTCAAGCAAC ATACACTCTG GCTCTGTCGG GAACACCTTG GCGCTCTGAC
AAAGCTCCAA TATGCTTATC TAATTATATC AATCCTAATA ATGAAATCGA ATGTAATTAC
GTTTACGGGT TAAATCAGGC TATAAGCGAT GGTGTTTGTC GTTCCCCTAA AATTGTTTTA
GTCGATAACG AAAAGATTAC TTTAAAGAGC TCAAAGTCTG AAGCAAAGAG TTTTACCTGT
ATTAATGATT TTTTAAACGA TTCTTTTGGT TCTTATCAGA CACTAATTAA TGATGAAAAG
TGCATGATGT ACCTGCTTGA AAAAGGCATA GAAAAACTTG AAAAAATCCG TAAAAATAAA
AAAAATGCGG CCGGATTAGT CGTAGCATCA TCAGTTGAAC ACGCAATAAG ATTATTCTCA
ATACTATCCA ATGAATTCAA GAAAGATACT GTATTGGTTA CTTATAAACA TAATGATCCA
ACCAGTACGA TAAATCACTT TCGACACAGC GAGGCTGAAT GGATTGTAAG TGTTGGTATG
GTTAGTGAGG GGACTGATAT TCCTCGACTT CAAGTATGCT GCCACTTAAG CAGAGTAAAA
ACCGAGCTCT ATTTTAGGCA GGTATTAGGT CGGATTCTTA GAGTAAACAA TGGTGATAAT
CAAGAAGCAT GGTTATACAC ATTCGCCGAA CCAAATTTGG TTGAATATGC TCATAGGATT
GATCAAGAAA TCCCAGAACA GAATTTAATT TTTTGTGAGG ATATGGACGT GGCGGTCTTC
ACTCCTTTAG AACCAAAAGA AAACGACTCA AAAGGCTTAA TATCTGACAT AAGAATCGGT
CTGGGAGAGT GGTGTCCTTT AAATGAAAAG AGTAGTGAGT TCCCGTTTAC GGGAGTTTCT
AACTATTTAG AAGAATCGGA TGAACACTAC TTTGATATTG TGGGTAGCTT TAGGCAACAA
ATCGTAGATG TGTTTCGATA G
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| Protein sequence | MMPLRQWQAE CVKLTLERYD SGHQHFLCLA TPGAGKSVMA AEVAFSLFKG NKIDFVLCFS
PSTAISQGLE QTFTSRLNCR FDGIIGALGA SYTYQNLQFF DDKFWELIKK NRVLVVFDEI
HHCAGSSLKD ANSWGEKIIE NIQFQATYTL ALSGTPWRSD KAPICLSNYI NPNNEIECNY
VYGLNQAISD GVCRSPKIVL VDNEKITLKS SKSEAKSFTC INDFLNDSFG SYQTLINDEK
CMMYLLEKGI EKLEKIRKNK KNAAGLVVAS SVEHAIRLFS ILSNEFKKDT VLVTYKHNDP
TSTINHFRHS EAEWIVSVGM VSEGTDIPRL QVCCHLSRVK TELYFRQVLG RILRVNNGDN
QEAWLYTFAE PNLVEYAHRI DQEIPEQNLI FCEDMDVAVF TPLEPKENDS KGLISDIRIG
LGEWCPLNEK SSEFPFTGVS NYLEESDEHY FDIVGSFRQQ IVDVFR
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