| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I0603 |
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| Symbol | nlpI |
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| ID | 6988991 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 667099 |
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| End bp | 668082 |
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| Gene Length | 984 bp |
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| Protein Length | 327 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 643378991 |
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| Product | lipoprotein NlpI |
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| Protein accession | YP_002262123 |
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| Protein GI | 209694195 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4785] Lipoprotein NlpI, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.297207 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGAATTGGA TTCGAATTAC GCTAGTCAGT GCCGTCTTAA TATTATCAGG ATGTGCATCA
ACAAAGGATT CTTCAAGTTG GATGTACCCG CCAATGGCAG TGCCTTTACA ACCGAGTATT
CAGCAAGAGA TTCAACTTTC TCGACTTAAT CAATTATTAT TACGCACTGA TATTGACGAC
GTAACTCGTG CAAAAATGTT TTATGATCGT GGGTTAATAA ATGACAGTTT AGGACTACGT
GACTTAGCGC GAGTGGACTT TACTCAGTCT TTAAATTTAA AACCAGATCA GAGTGATGTA
TTTAATATTT TGGGTGTTTA CTACACGCAA AATACCGATT TTGATGGTGC TTATGAAGCC
TTCGATTCTG CCTTAGAATT AGATCCATCG AATCAATTTG CAGAACGAAA TTTAGCGATT
GCCCTTTATT ATGGTGAGCG TTATGACCAA GCTTATGAGA TAGCAAAAAA ACACTATAAT
GATGCACAAA GTGATCCGTA CCGTGCTATT TGGTTATATT GGATTGGTTT AAATGTGGAT
GCAACAGCCG CAACAGAAGC ATTTAAAATA CAGTACCAAG AAAGAACAGA TGAAGATTTT
GGTTGGGATT TAGCGGGTGT TATTTTAAAA GAAACATCGG ATGATGCTTT CTTTCAAAAA
ATCTTAACGA CGACTCGAAA TAATACCGCA CTTGCTCAGA AACTAACAGA AGGGTACTTT
TACCTTGGTA AGCGTTATCA GTATGAAGGG GATTACCCTA CTGCGATTGC ATTATACAAG
TTAGCTATGT CAAATAATGT GTATGAATTT GTAGAACATC GTTACTCTTT CATTGAACTG
GGTAATATTT TTAAAACGCT GCGTGAATTA CAAGAACAAA AACAGAAAGA ACAGCAAGCG
TTAGAAGTGA AAGAAAAGCA GAATAGCCCA GAGCAAGACA GTGTAGAAAA AGAAGAATTA
AAGAAGGAAG CGACTACTAA ATAA
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| Protein sequence | MNWIRITLVS AVLILSGCAS TKDSSSWMYP PMAVPLQPSI QQEIQLSRLN QLLLRTDIDD
VTRAKMFYDR GLINDSLGLR DLARVDFTQS LNLKPDQSDV FNILGVYYTQ NTDFDGAYEA
FDSALELDPS NQFAERNLAI ALYYGERYDQ AYEIAKKHYN DAQSDPYRAI WLYWIGLNVD
ATAATEAFKI QYQERTDEDF GWDLAGVILK ETSDDAFFQK ILTTTRNNTA LAQKLTEGYF
YLGKRYQYEG DYPTAIALYK LAMSNNVYEF VEHRYSFIEL GNIFKTLREL QEQKQKEQQA
LEVKEKQNSP EQDSVEKEEL KKEATTK
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