Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I0265 |
Symbol | |
ID | 6988670 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | + |
Start bp | 312237 |
End bp | 313691 |
Gene Length | 1455 bp |
Protein Length | 484 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 643378646 |
Product | putative metallo-beta-lactamase |
Protein accession | YP_002261801 |
Protein GI | 209693873 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1236] Predicted exonuclease of the beta-lactamase fold involved in RNA processing |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCAACAC CCCAAAAACA CTCAACCCAA AGCACAAATT TTGAAATAAA CCTAAAACAC CACGGCGGAA AACTCGGCGT CACCGGCTCT TGCCATGAAC TCTGCATTAA TAGCAACGGC AATAAGCACG GCATATTAAT CGACTGCGGT TTATTTCAAG GCAAAGACGC TAAAGATAAA CATGGCAATG ACAAAAAACT TGATATTGAA TTTCCCATCT CACACCTCAA AGCATTAATC CTCACCCATA CCCACATAGA CCATATCGGT CGCTTACCTT GGTTATTAAC AAAAGGCTTC AAGCAACCCA TATACTGCAC ACCAGCAACC GCTGAGTTAG TACCACTCAT GCTAGATGAT GGCTTAAAAC TGCAACTCGG GCTAAACAAA GGCCAAAGAG AAAGAGTATT AGAATTAATA AGAAAACAGA TAAAACCCAT TCCATACAAC CAATGGCACC GAATTAAACT CACCTCTACA ATGGTACCTT CTCACTCTAA AAGTTCTTGT TCTTCCCTGA AAGCGAAGCG TCCTGAATCC TTAAACCTGC TCTTAAGATT CCAACCCGCC GGCCACATCC TCGGCTCCGC TTACGTCGAA ATCAAACTCC CCAACGATGA AATCGTCGTA TTTTCAGGCG ATCTTGGTCC ATCCAATACC CCATTACTTC CCGATCCAAT TTCACCAAAA CGTGCCGACT TATTAGTAAT AGAAAGCACT TATGGCAACA AACTTCACGA CAGTGTAGAA ACCAGAGCAA AGCGACTGCA AGAGATAATA GAACGTTCAC TACAAGATGG TGGCGCAATC ATTATTCCCG CATTCTCAGT CGGCAGAACC CAAGAGCTGT TGTTTGATAT TGAGCACTTA ATTCATCACA ACAAAATAGA CTCAAAAATT CCTATCATTT TAGATTCTCC ATTAGCCAAC AAAGTCACCA AACAATATCG CCGATTCAAA AAACTCTGGA GTAAAGAAGC GAAAACCAAA CTCAACAATC AACGGCATCC ACTTAATTTC GAACAATGCA TCACCATAGA AAGTCACAAA GAACATATGC AAATCGTCAA CCGCCTAAAA AGCACCGCAA AGCCCTGCAT AATAGTCGCC GCCAGCGGCA TGTGCGCTGG AGGCCGAGTG ATGAATTATC TAGAAGCGTT ATTACCAGAT AAACGCACCG ACATTATTCT TGCCGGTTAC CAAGCCCACG GTACTCTAGG CCGAGATCTG CAAAACCAAA GATCAACGGT CTGGATAGAT AATCAACCAG TAGATGTAAA TGCTCAAATC CATACCATGT CAGGCTATTC AGCCCACGCC GATCAAGCAG ATTTAATTAA GTTTGTTGAT GGGATTGAGG AGGGAAGGAA GGAGGTGGTT GTGGTGCATG GCGAGGATAA CGTGCGCGAG GAGTTTGAGA GGGTACTGGA GGCTAGAAAC TATACGCTGC GCTAG
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Protein sequence | MPTPQKHSTQ STNFEINLKH HGGKLGVTGS CHELCINSNG NKHGILIDCG LFQGKDAKDK HGNDKKLDIE FPISHLKALI LTHTHIDHIG RLPWLLTKGF KQPIYCTPAT AELVPLMLDD GLKLQLGLNK GQRERVLELI RKQIKPIPYN QWHRIKLTST MVPSHSKSSC SSLKAKRPES LNLLLRFQPA GHILGSAYVE IKLPNDEIVV FSGDLGPSNT PLLPDPISPK RADLLVIEST YGNKLHDSVE TRAKRLQEII ERSLQDGGAI IIPAFSVGRT QELLFDIEHL IHHNKIDSKI PIILDSPLAN KVTKQYRRFK KLWSKEAKTK LNNQRHPLNF EQCITIESHK EHMQIVNRLK STAKPCIIVA ASGMCAGGRV MNYLEALLPD KRTDIILAGY QAHGTLGRDL QNQRSTVWID NQPVDVNAQI HTMSGYSAHA DQADLIKFVD GIEEGRKEVV VVHGEDNVRE EFERVLEARN YTLR
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