Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I0185 |
Symbol | |
ID | 6989406 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | + |
Start bp | 226012 |
End bp | 227043 |
Gene Length | 1032 bp |
Protein Length | 343 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 643378570 |
Product | glycosyl tranferase |
Protein accession | YP_002261728 |
Protein GI | 209693800 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0438] Glycosyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.472574 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGAAAA TTTATCATGT TAATCTTGCT CGTGGTTTCA GTGGCGGGGA ACAGCAAACC CTCGCACTCA TCCAGCAACA TCTAAAAGAG AAGCAAAATA TCGCAGTGAT TGCTCTAACT AACAGCCCTT TTTATAACGC GATATCAGAT TTAGGCTGCG AAGTTATTAC TGTTCGACAT TATCTACTAG GTCACACGAT TTCTCTTCCG AAAGACGCGG TTTTACATGT TCATGAGGGG CATGCTATCT ATTGGGCTGC ACTTCAACAT AAAGTAAGTC AAACGCCTTA TATCATTACT CGACGTTTAG ATAATCCTAT TAAGAAAAAA TGGCTCACTA CTTTTGCGTA TTCAAATGCA GCGGCCATTG TTGGGATCAG TACTTGTGTT TCTGAGGTAG TGCGACAACG CCTTCCGCAA CAACATATTA TGACGATTCC TGATTCACCG GTTACTTATC CGATCAATCA TTCTGAAGTC GCGAATATTA GGGAGCGATT TAAGGATAAA TTTTTGGTTA TTCAAGCCGG TAATATGATC CCTCATAAAG GGTTTGATGT CACCGTTAAC GCCGCAATGC TACTGAAAGA TCCTCGTGTT CATATCTGTT TATTGGGGGA TGGGAAACAA CGCTGTGAAC TAGAAAAGCA AGCTTCAGGA TTAACTAATA TTTCGTTTAT GGGTCGTCAA CATAATATGG GTGACTGGTT TGCGGCTGCA GATTTGTTGA TCCACCCTTC TTATACTGAA GGGCTCGGGT CTGTGATTTT AGAAGGCATG AGTACAGGCC TTCCTGCTAT AGGTTCGCGT GCAGGAGGGA TCCCTAACAT TATCGAACAT GAAAAATCAG GGCTACTTAT CGAGCCGGGT AACTCTACAG AACTGGCAGA ACACATTGAA AAAATAGCTA ATAATGCCAC GCTAAAAGAG CACTTAATTG AAGGTGGGTG GGAAAAATTA ACCGCCTTTA TGATTGAGCA TACTGCGGCT CTGTATTTCA AGGTTTACCA ACGAGCTTTA CAACATGACT AA
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Protein sequence | MMKIYHVNLA RGFSGGEQQT LALIQQHLKE KQNIAVIALT NSPFYNAISD LGCEVITVRH YLLGHTISLP KDAVLHVHEG HAIYWAALQH KVSQTPYIIT RRLDNPIKKK WLTTFAYSNA AAIVGISTCV SEVVRQRLPQ QHIMTIPDSP VTYPINHSEV ANIRERFKDK FLVIQAGNMI PHKGFDVTVN AAMLLKDPRV HICLLGDGKQ RCELEKQASG LTNISFMGRQ HNMGDWFAAA DLLIHPSYTE GLGSVILEGM STGLPAIGSR AGGIPNIIEH EKSGLLIEPG NSTELAEHIE KIANNATLKE HLIEGGWEKL TAFMIEHTAA LYFKVYQRAL QHD
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