Gene VIBHAR_07039 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_07039 
Symbol 
ID5558833 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand
Start bp2114440 
End bp2115195 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content44% 
IMG OID640911507 
Producthypothetical protein 
Protein accessionYP_001449140 
Protein GI156978234 
COG category[E] Amino acid transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGGAC TGTTACGAAC ATTAGGCTTT AGTTTTATAG CCTTAAGCTC TTACGCTATG 
GCAAGTGAAG TGAATTATTA CGTGATAGCT GATCAAGCCA GACCATTTCA AATTGAGCAG
CAAGGTGAAC AGCATTCAGG AATTGTGACA GACATTGTTA GTGCTATCTT TGCCGAATCC
GATTATGAAG TGAAATACCA CACCTACCCA TTCAAGCGCA TGATTTCGGT ACTCGAAGCG
GGGGGAGAAG AAAATTGGGT CACTTACGGC AGTCCAAAGT GGGGGAAGGT TCAATCGGAA
AATCTCTCAG AACAACCTAT TTACACTGTA AAACACGTAT TAGTATCGAG CAGTAAAGCA
CCATTCAAAT TCAGCGATAT GCAGCACATG CAAGGTCGTT CAATTGTGCT TCTGCTTGGC
TTTGATTACC CGAATCTCAG CCCTTTCTTT GAAAATGGTA CCGTCAATGA AATGCGCGTC
AAAGATTACG AGGCCGCCTA TCGCGTTTTA CAACGAACCC CTGGCGATAC CGTTTTTGTC
GAAATGGAAT CACGCGTCGT TTACAACATT CATCGTTTAG GACTGCCGAT GGGCGACTTC
CAAATTCAAT CTTTCAGCGC AGTGATACCA GACTACGCCA TCTATCTCGC TTTCTCCCCT
AAGATGAACC CCAAAGTGCA GAGCTTTATC AATAAACGCC TAGCAGTACT CAAAAGCTCC
GGAGAACTCG ACGACATCAT CAAAAAATAT ATCTAG
 
Protein sequence
MKGLLRTLGF SFIALSSYAM ASEVNYYVIA DQARPFQIEQ QGEQHSGIVT DIVSAIFAES 
DYEVKYHTYP FKRMISVLEA GGEENWVTYG SPKWGKVQSE NLSEQPIYTV KHVLVSSSKA
PFKFSDMQHM QGRSIVLLLG FDYPNLSPFF ENGTVNEMRV KDYEAAYRVL QRTPGDTVFV
EMESRVVYNI HRLGLPMGDF QIQSFSAVIP DYAIYLAFSP KMNPKVQSFI NKRLAVLKSS
GELDDIIKKY I