Gene VIBHAR_06933 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_06933 
Symbol 
ID5556973 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand
Start bp2026457 
End bp2027254 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content46% 
IMG OID640911401 
Producthypothetical protein 
Protein accessionYP_001449034 
Protein GI156978128 
COG category[R] General function prediction only 
COG ID[COG0561] Predicted hydrolases of the HAD superfamily 
TIGRFAM ID[TIGR00099] Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily
[TIGR01484] HAD-superfamily hydrolase, subfamily IIB 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCACAAG CTAGCATCAA ATTTATTGCC ACCGATATGG ATGGCACCTT GCTTGACCAA 
TATGGTCGTT TAGACCCTGA GTTCTTTGAT CTGTTTTTGC AGCTAGAAGA GAAGGGCATT
TTGTTTTCGG CAGCATCGGG TCGTCAGTAT TACAGTTTGC GCGATACGTT TGCACCGATT
CAAGATCGTA TGATTTATGT GGCGGAAAAC GGCACCTTGG TGATGTATCA GGACAAAGAG
TTATACAGCT GCACCATTCC AAAGTCGGAA ATTGATGCGA TCATTCAAGC GGCTCGCGAA
ATTGAAGGTA CGCACCTAGT GCTGAGTGGA AAGCGCTCTG CATACATCGA AACTCAAGAC
CCGAAAGCGT TGGAGGAGTT CCAGAAATAC TACCACCGTT GTGAATACGT GCCAGATTTA
TTGGCCGTAG ATGATGAATT CATCAAGGTC GCGATTTGTC ATTTTGGTGG CTCGGAAGAG
TTAGTGTACC CAACCATGAA AGCGAAGTTC GATGACACGC ATCAAGTGGT GGTGAGTGCG
AAGATTTGGC TGGATGTCAT GAATGCTGAA GCATCAAAAG GTGCGGCCAT CAAACATCTT
CAAGAAACCA TGGGTTTTGG TCCTGAAGAG ACCATGACGT TCGCTGATTA CCTGAATGAC
CTAGAGATGC TGCAAGTGAG CAAGCATTCC TACGCGATGG AAAACGCGCA CGAAGCGGTG
AAGAAAATCG CACGCTTCTC AGCACCAAGC AATCGTGACT CTGGCGTAAT GAAAGTGATC
AAAGAGAAAG TGCTGTAA
 
Protein sequence
MSQASIKFIA TDMDGTLLDQ YGRLDPEFFD LFLQLEEKGI LFSAASGRQY YSLRDTFAPI 
QDRMIYVAEN GTLVMYQDKE LYSCTIPKSE IDAIIQAARE IEGTHLVLSG KRSAYIETQD
PKALEEFQKY YHRCEYVPDL LAVDDEFIKV AICHFGGSEE LVYPTMKAKF DDTHQVVVSA
KIWLDVMNAE ASKGAAIKHL QETMGFGPEE TMTFADYLND LEMLQVSKHS YAMENAHEAV
KKIARFSAPS NRDSGVMKVI KEKVL