Gene VIBHAR_06008 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_06008 
Symbol 
ID5557795 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand+ 
Start bp1194028 
End bp1195044 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content47% 
IMG OID640910482 
Producthypothetical protein 
Protein accessionYP_001448128 
Protein GI156977222 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0609] ABC-type Fe3+-siderophore transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTTTTA TTAATGTCAT GCAAAGTAGA AAAGCGCTAT TTGGCTGTTT CGTTGTTTTT 
TTAGCACTCA GTTTGGGGAC GGTTGCATCT ATGATCAGCT ACTCCTCTTT TGAGCTTAAG 
ATCCACGACT TATTGGGGTT CTGGTTTAGC TTTGATGAAG CAAATATAAA ACATCAGATT 
CTCTCATCGT TGAGAGCCCC CCGTGTACTG GCCTCTATCC TGATTGGTAT CAATCTCGCG 
ATTGCTGGGC TTCTTATGCA AGGGTTAACA GCCAATCCAC TGGCGTCTCC AAGCATTTTG 
GGGATAAACG CCGGGGCATC TTGTTTTATC GCTATCTCTT CCATGAATTT GGTTTTCTTG 
CCTGAATTAC CACTTTCCGT TAATGCATTG CTTGGTGGCG CGGTAAGCGG ACTGCTCGTA 
CTTTCTTTAG GTGGTTTCTT TGCTGGTAAG TCACATCCAA TTAAGTTGGT ATTGGCCGGC 
ATTGCCGTTA ACGCCCTGTT AGTTGGTATT ACTAGAAGTG CATTAATCCT AGCCGATGAT 
ATGGCCTATA GCGTTTTGAA CTGGCTGGCT GGGTCGATCG CGAACATCAC TTGGGAAGAC 
TGGGCACAAT TTTGGCCTGT GAGCTTGGTT GGAATCGTTT TGACCATATC ACTTGCTCGT 
AATCTTAACT TGCTGACTCT TGGCGACGAT ATTGCGACCG GACTTGGTGT GAACCTCAAC 
CGTACACGTG TTATTGCTTG TATTTCCGTG CTGTTGCTAA CCACATCGAG TGTCGCTATC 
GCGGGACCTA TCGCTTTTGT TGGCCTACTT GTTACTCATA TCGCCCGTAA GCTTGTTGGC 
ACCAATCACT TTATTTTGCT GCCTGTCACC GCGATGCTTG GCGCAAGCCT TTTGGTGTGG 
TCTGACGTTA TTTCACGCAT GGTCGCGTTC CCAGCAGAAA CGCCAGTCGG GGTTATTACT 
GCATTGATTG GTTCGCCATT CTTCATTGCA CTGGCCGTTA GGAGCAAAGT GTCATGA
 
Protein sequence
MSFINVMQSR KALFGCFVVF LALSLGTVAS MISYSSFELK IHDLLGFWFS FDEANIKHQI 
LSSLRAPRVL ASILIGINLA IAGLLMQGLT ANPLASPSIL GINAGASCFI AISSMNLVFL 
PELPLSVNAL LGGAVSGLLV LSLGGFFAGK SHPIKLVLAG IAVNALLVGI TRSALILADD 
MAYSVLNWLA GSIANITWED WAQFWPVSLV GIVLTISLAR NLNLLTLGDD IATGLGVNLN 
RTRVIACISV LLLTTSSVAI AGPIAFVGLL VTHIARKLVG TNHFILLPVT AMLGASLLVW 
SDVISRMVAF PAETPVGVIT ALIGSPFFIA LAVRSKVS