Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_05899 |
Symbol | |
ID | 5558221 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009784 |
Strand | - |
Start bp | 1091317 |
End bp | 1093506 |
Gene Length | 2190 bp |
Protein Length | 729 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640910373 |
Product | chitinase |
Protein accession | YP_001448019 |
Protein GI | 156977113 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3469] Chitinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTAAAAC GTAAAGCTCT ACAATTAGCA GTATCAGTCG GCATAGCGGC CATGTCGGGC GCTGTTTATG CAAATGGATC GGACATGACG AATCCAGACT CAGGTGTCGT CGTTGGTTAT TGGCAAAACT GGTGTGATGG CGGTGGTTAT CAAGGTGGTA ATGCGCCTTG CGTGACACTG GATGAGGTAA ACCCGATGTA CAATATCGTG AATGTGTCAT TCATGAAAGT GTACGATGTG GCGGATGGCC GAATTCCAAC TTTTAAACTG GACCCAACGG TTGGGCTTTC AGAAGAACAA TTTATTGATC AAGTCTCAGA ACTCAACAAG CAAGGTCGCT CTGTACTGTT GGCTTTGGGT GGTGCAGATG CACACGTAGA GCTAGAAACT GGTGATGAGA GAGCTTTTGC TGATGAGATC ATTCGTCTTA CGGAGCGTTA TGGCTTTGAT GGTCTAGATA TCGACCTAGA GCAAGCGGCC GTCACTGCTG CAAACAACCA AACCGTTATT CCTGACGCAC TGAAGCTAGT GAAAGATCAC TACCGCGCAG AAGGTAAAAA CTTCCTTATT ACTATGGCGC CAGAGTTCCC GTACCTAACG ACGGGTGGTA AATATGTTCC TTATATCGAT AACTTGGAAG GTTACTACGA TTGGATCAAC CCGCAGTTTT ATAACCAAGG TGGCGACGGC ATCTGGGTTG ACGGTGTGGG CTGGATTGCT CAAAACAACG ATGAGCTAAA AGAAGAGTTC ATTTACTACA TCTCTGACTC TTTAATCAAC GGAACCCGTG GTTTCCATAA GATCCCGCAC GATAAGCTTG TGTTTGGTAT CCCTTCGAGT ATTGACGCAG CAGCAACCGG TTTTGTGAAA GAGCCACAAG ATCTATACGA CGCGTTCGAT AGTTTAACGG CTCAAGGGCA GCCTTTACGC GGTGTAATGA CGTGGTCTAT CAACTGGGAT ATGGGCACCA ACAAAGCCGG ACAAGCATAC AACGAACAAT TCATTAAAGA CTACGGTCCA TTTGTTCACG GCCAAGTGAC ACCGCCACCG GTTGAAGGTG AGCCTATGTT GAAAGGTGTT GAGAATACAC GTGTTCTTCA CGGCACTGTT TTTGACCCGA TGGAAGGCGT GACAGCAACA GATAAAGAAG ATGGTGATTT AACCTCATCA ATTGATGTTG AAGGTTATGT CGAGACCAGT GTTATTGGAA CTTATGTGCT GACTTACCGC GTAAAAGACA GTGATAACAA TGAAACAACC AAGGCAAGAA CGGTAGAAGT TTACAGCCAA AAACCTGTTT TCGATGGCGT GTCGGATACT ACTGTAGTGC TTGGTAACTC ATTCGACCCA ATGGCGGGTG TTACAGCAAA TGATGCTGAA GACGGTGACC TAACAAGTTC AATTATACAC ACTGGCAGTG TCGATGTGAA TGAGATAGGT AACTACACGC TTGTTTACCG AGTAACAGAT AGTGCAAATC AAACGGTAAC TGCTGAACGT AAAGTGACTG TGACTGACGG TTCGAACTGC GCAGCAGCAT GGGATGCTAA TACAGTTTAT GTCGAAGGTG ATCAGGTATC CCACGATGGA GCAACTTGGG TGGCGGGTTG GTACACTCGT GGTGAAGAGC CGGGAACAAC TGGTGAGTGG GGCGTTTGGA AGAAAGCGTC AGACAGTTCA TGTGGTGGCA ACCCAAGTCC AGGTGGTGAC GTAGAACTGA GCGTGTCTGG TCTGCAGTCT GAATACATTC TAGATAATGG CGATGTACGT ATTCAGTTCA CATTGGCGTC GAATGAAGCG CTTGATGTAA TCGCAAAGGT GATCAATAGC GCGGGTTCTG TGGTTGAACA GACCAACGTG AACCTAACTG ATAGCCGCAC GGTTACGATG GACCTGTATG ATGTTACAGA AGGTCAGTAC AAGCTTGAAG TGGTTGGAAC AGCGACAGAT GGCGAAGTGG TGATGGTGGA TAACTCGTTC TCAGTAAAAG AAGAGGGCGG AACAACACCT CCTCCGGGTA ACTACCCTCC GTATGCAGCA GGTACTAACT ACGAAGCAGG CGACATCGTG GTAGGTAATG ACAATGGTTT GTACGAATGC AAACCTTGGC CTTACACGGC GTGGTGTGCA AGTGCTTCGT ATGCGCCGGG CGATAGCCTG TACTGGCAAA ATGCTTGGAT TAAGCTTTAA
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Protein sequence | MLKRKALQLA VSVGIAAMSG AVYANGSDMT NPDSGVVVGY WQNWCDGGGY QGGNAPCVTL DEVNPMYNIV NVSFMKVYDV ADGRIPTFKL DPTVGLSEEQ FIDQVSELNK QGRSVLLALG GADAHVELET GDERAFADEI IRLTERYGFD GLDIDLEQAA VTAANNQTVI PDALKLVKDH YRAEGKNFLI TMAPEFPYLT TGGKYVPYID NLEGYYDWIN PQFYNQGGDG IWVDGVGWIA QNNDELKEEF IYYISDSLIN GTRGFHKIPH DKLVFGIPSS IDAAATGFVK EPQDLYDAFD SLTAQGQPLR GVMTWSINWD MGTNKAGQAY NEQFIKDYGP FVHGQVTPPP VEGEPMLKGV ENTRVLHGTV FDPMEGVTAT DKEDGDLTSS IDVEGYVETS VIGTYVLTYR VKDSDNNETT KARTVEVYSQ KPVFDGVSDT TVVLGNSFDP MAGVTANDAE DGDLTSSIIH TGSVDVNEIG NYTLVYRVTD SANQTVTAER KVTVTDGSNC AAAWDANTVY VEGDQVSHDG ATWVAGWYTR GEEPGTTGEW GVWKKASDSS CGGNPSPGGD VELSVSGLQS EYILDNGDVR IQFTLASNEA LDVIAKVINS AGSVVEQTNV NLTDSRTVTM DLYDVTEGQY KLEVVGTATD GEVVMVDNSF SVKEEGGTTP PPGNYPPYAA GTNYEAGDIV VGNDNGLYEC KPWPYTAWCA SASYAPGDSL YWQNAWIKL
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