Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_05847 |
Symbol | |
ID | 5556911 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009784 |
Strand | - |
Start bp | 1031179 |
End bp | 1033335 |
Gene Length | 2157 bp |
Protein Length | 718 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640910321 |
Product | hypothetical protein |
Protein accession | YP_001447968 |
Protein GI | 156977062 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGTTTGT CGTTAAACCT CGTGATTGCA TCCACGTTTG GAGCTGTTGC TCCTGCCTCT GCTAACTATG ATCTAGATTC TTTACTAGAA ATGCCATTGT GTTCCTTGGC TGAAACCAAG GTTGTTTCGG CCACTCGAAC CTCGCAATCC CTTGCAGATA CGCCCGCGTC TGTATATGTC ATTACCGCAA AAGAGATTAA ACGCTCTGGT GCGCGCTCGG TTGCTGATGC GCTATCTTTG GCACCCGGTC TTCATGTCGC AAAATACTCC AACTACGATT GGGGAGTGAC GGTGCGTGGC AATAACGAAA CCTTGAACAA TAAAATGTTG GTCATGGTCG ATGGCCGTAG CGTTTTTAAC CCAATGTCTT CAGGTGTCGA TTGGGATTTG ATCCCGGTCA GCATGGAGAA TATATCTCAG ATCGAAATCG TACTTGGCCC GGTCGGCACA GTATGGGGTG GCAATGCCGT AACAGGTATT ATTAATGTCA TCACAAAAGA AGCGGATGGT GTAGCAAAAG GGAAGGTATC TGCTAGCTTC GGAAACTACG ATTACCGTGA ATATCAGCTC TATCATGCTG GCTCTGTTGG TAAATACGCA AACTACAGTC TTTACGGTGA GTTTGTTGAT CATATGCCGT GGACAAGTGA TGATGCGCGT GTAAAGCCAT TCCAGCATTT CAATGTGTAT ACCGAGCGCT TTGGTGGTCG TTTGGATTAT CAGAAGCATG AACATACATT GAGCGTACAA GCGGGTGGTA TTCGTTCGCG TGAAGATGAC AACTGGGGTA ATTTCCAACC GCACTTTATC ATGTCAGGTG CAGAGCCAAT GCGTACTCAC GAAGCGGAAA TGACGATGCA AGAGTACTTC GTTGGTGGCC ATCATGTGTT TGACCGCAGC AATGGCGACA GTTGGGAAAA CGAGCTGTGG TTGACTTACA GCTCTAACGA CAGTACCCAC GCGAATGCAC AGTTTCTTAG AACCGATTTA GATTCTCACT ATACTTTTTC GGACTTATGG GGAACAGAGC TCACCGTCGG TGGCAATATC CGATTGATTG ATGAAAAGTT TGGCACGTTC TCCACATATG AATTGGTGAC GATGCCTTAC CTTCGCGTAG CAGAAGATCC AGACTTCCTA AACCAGTCTT ACGGTTTGTA CATGAACTGG AACATTCCTG TTATGGACAA AACCAAACTA ACGCTGGGCA ATCGCTGGCA GTACAACAAC CTGACTCATG ATATCGATCC GCAGCCACAA GTTCGCTTGA GTTATGAACT CGCAAACAAC CAAAGAATTT GGGCTGGGTG GGGTAAAGCG ATTGTGACGC CTTCACGTCT TGAGCTAAGC ACCTACATGC GTGAAAACCA GTACATGCAG AACGTTATGT TTAGCGATAA CAATTACTAC GATTACTACT ACAGCACGAT ACTCAAAGGC AATGAGGATC TCGATGTCGA ATCGGTTTCT ACCTATGAAC TTGGGTATCG TTTTTGGGAT GAGCACAGGC TGCAATTCAG CATCGGGGGC TTTTATACCC GACACGAGAA CATTCGCGTT TATAAAACAG AGTCAGCGTC GCAAATCATC ATTGGTGAAG GTTCATCGCC TGGTAGGGTT GGCACGGTGG TAGAGCAGTA CACTTCTCAG TTGGTGGATC CAATTTGGAG TGAGAGTTTT GGTGGTGAAA TCGCTGTGAA ATGGCAACCC CGTGATGATC TCCAAATTAA TGCCAACTAC AGCTATAAGC GAATTGTTGG TCACTGCGAA GGTGCCATCT GCTCAAGCAA TGATGCTGTA AAACGAATGA TTGAAAATGA GCCAAACCAT TTTGTGAATG CCCAAGTAAT GTGGGACATC ACGCCTCAAT GGTGGGTAAG TGTCAGTGGG CAATATGTTT CTGAATCGGA ACTGCATGAA GATTATGAAT CGGCATTGCA TCCTGTTTCT GTAGCAAATA AAGACTACAG CTGGCCTGAA GTTGTGTCTT TTGATGCCTC TTTGAGTTGG CAATACAACG ACTGCATGCC TGAGATTACA GCCTCAGTAG AGAATCTAGG AGCGAATCAA AGCAAAGAGT TTCCCAATAA TTACAACTCT TTTGCCAATG GGACTCAGTA CTGGCTGACC TTAGATTGGA ATTACGCCGG ATGGTAA
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Protein sequence | MRLSLNLVIA STFGAVAPAS ANYDLDSLLE MPLCSLAETK VVSATRTSQS LADTPASVYV ITAKEIKRSG ARSVADALSL APGLHVAKYS NYDWGVTVRG NNETLNNKML VMVDGRSVFN PMSSGVDWDL IPVSMENISQ IEIVLGPVGT VWGGNAVTGI INVITKEADG VAKGKVSASF GNYDYREYQL YHAGSVGKYA NYSLYGEFVD HMPWTSDDAR VKPFQHFNVY TERFGGRLDY QKHEHTLSVQ AGGIRSREDD NWGNFQPHFI MSGAEPMRTH EAEMTMQEYF VGGHHVFDRS NGDSWENELW LTYSSNDSTH ANAQFLRTDL DSHYTFSDLW GTELTVGGNI RLIDEKFGTF STYELVTMPY LRVAEDPDFL NQSYGLYMNW NIPVMDKTKL TLGNRWQYNN LTHDIDPQPQ VRLSYELANN QRIWAGWGKA IVTPSRLELS TYMRENQYMQ NVMFSDNNYY DYYYSTILKG NEDLDVESVS TYELGYRFWD EHRLQFSIGG FYTRHENIRV YKTESASQII IGEGSSPGRV GTVVEQYTSQ LVDPIWSESF GGEIAVKWQP RDDLQINANY SYKRIVGHCE GAICSSNDAV KRMIENEPNH FVNAQVMWDI TPQWWVSVSG QYVSESELHE DYESALHPVS VANKDYSWPE VVSFDASLSW QYNDCMPEIT ASVENLGANQ SKEFPNNYNS FANGTQYWLT LDWNYAGW
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